Hippoglossus stenolepis (Pacific halibut): 118109972
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Entry
118109972 CDS
T08308
Name
(RefSeq) cingulin-like protein 1 isoform X1
KO
K21110
cingulin-like protein 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
118109972
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Gene cluster
GFIT
Motif
Pfam:
Myosin_tail_1
Taxilin
Motif
Other DBs
NCBI-GeneID:
118109972
NCBI-ProteinID:
XP_035013358
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All DBs
Position
5:complement(13106479..13118006)
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AA seq
1059 aa
AA seq
DB search
MESHRLSGSSDVRIQRSYVQEQDNLFGVRVQVQGIKGQPYIVLNSSGQESHRDVSVITHQ
AGYNPGMVRRSVDERRSPAETQRAASSSGFHYQQHPEILSPYDPENNNLTRLIPSKTASA
AQPGLPPEKTTNMTKPRIPLPAEGPVEEAQNKMPPACGHIPTRSPNYVEADSIVSVGKLI
SQFNSSQRRGRGGPRNRLDPEHCRRSRSVDSRHPSDSSTCSSSSSRPSSLKGLRGETPGG
TYLSGSAGARHHSVDGSLANQREENKHSTLPRVHNGKKAISPHAAKLLHRTEKASNSRSC
SDQTDESDERDTQVTPDLLKGQQEVSVDPTEDTAKQVLFAYLKDGTTDDDSTTERKVNLL
LQRINKLKWRTAKNVEEEEKDYAAEVKRLQGKQTVLEREVTGLRQKLETEMKNEKTLAVA
CEKARAEKKRLQEELTKSQTELNKMRDRLAEILAELHSTKQELNQMKAERERSRTEMKDL
QQQLSEMHDELDQAKKAEVINTEKEILQKDMAQLRADFLETLQVKEEQEEVLHHLERELI
ALKGALKEEVESHDQYMAALKEEYEQELQKLLGDLELAKESNGVLCQEKVEVEEEKGVAK
VHLKELSQEREQLRGKVLELNKRVDQLSQGIQEARTTERLLEQRAKQLEREKQQVEEMLK
DVRRNEEDMSQSNQSLVSRLEDVQSKLTKLNHEHRDLKEKLKDERKQMEELWKIKTELED
ERRMQDRAVEQLQRKMNSIMEECEASTDVLQNQIDEAREKSQRELAELRRQLQEKGAELE
KSRQAAKKLQEELLPLDEELQRCRGEQQEAQLRGQELEQRLEELDERSAATVEERERQVK
LMEGRISHLVEDLNDERSSADRLMERLDKTKDQMDQMRNELMQERAVRQDLECDKMSLER
QNKDLKSRVTHLEGSQRTNQDSLVSKLSSRIQELEEKLQGEEQDNNSLQQANRKLERKVK
EMKMQADEEQVNLQSQRDQLTQRLKTSKRQMDEAEEEIERLEHSKKKLQRELDEQIEANE
QLHGQVTTLRNEMRRRKKSPPLIKVVEDDGNDVDDFGSD
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgcacagactcagtggctcttcagatgtcaggatacagaggagctacgtgcag
gagcaggacaacttgtttggagtgagggtgcaggttcaagggattaaaggtcaaccttac
atcgtgctgaacagttcgggccaggagagccacagggacgtctctgtcataactcaccag
gccgggtacaacccaggtatggtgaggaggtcagtggatgaaagacgctccccagctgag
acacagagggctgcttcctcctccggatttcattatcagcaacatccagagattctgagc
ccttatgaccctgaaaataataacctcacccgcctcattccttcaaaaacggcctcggct
gcccaacctggacttcctcctgagaaaaccactaacatgaccaaacccaggatccctctg
ccagcggagggcccagttgaagaagcccagaacaagatgcctcctgcatgtggacacatc
cctacacgatccccgaactatgtggaagcagactccatcgtatctgtggggaagctgata
agccagttcaacagcagccagcggaggggaaggggcggcccgaggaacaggctggacccc
gagcattgtcgaaggtcacgcagcgtggacagcagacatccctcagactcctccacgtgc
tcctcttcctccagccgaccctcatctctgaagggcctcaggggggagaccccaggtggg
acatatctctccgggtcagctggggctcgacaccatagtgtagatggctctttggcgaac
caaagggaggagaataagcacagcacactgcccagagttcataatggaaaaaaggccata
tctccacatgctgcaaaactgcttcacagaacagagaaagcgtccaactccaggtcgtgt
agtgaccagacggatgaatcagacgaacgagacactcaggtcactcctgatcttctgaaa
ggacagcaagaagtctcagtcgacccaactgaagacaccgcgaaacaagtactgttcgcc
tacctcaaggatgggacgactgacgacgactccaccactgagaggaaagtcaacctgctg
ctccaacggatcaacaagctcaagtggaggactgctaagaatgtggaggaggaggagaaa
gattacgctgccgaggtgaagcggctgcaggggaaacagacggtgctggagagagaagtg
actgggctgaggcaaaaactggaaactgaaatgaagaatgaaaagaccctggccgtggcc
tgcgagaaggccagggcagagaagaagaggcttcaggaagagctgaccaagagtcagaca
gagctcaacaaaatgagggacaggctggctgaaatcctggcagagcttcactccaccaaa
caggaactgaatcagatgaaggcggagagggaacgttctcgtacggagatgaaagatctt
cagcagcagctctctgagatgcacgatgagctggaccaagccaagaaggccgaggtgata
aacacagagaaagaaatcctccagaaggatatggcacagctgcgtgccgacttcctggag
acgctgcaggtgaaggaggagcaggaggaggtgctgcaccacctggagagggagctcatt
gccctgaagggggcgctcaaagaggaggtggaatctcatgaccaatacatggccgctctg
aaggaggaatatgagcaggagctgcagaagctgctcggagatttagagctggccaaagag
agcaacggcgtgctgtgtcaagagaaggtggaggtggaggaggagaaaggtgtggcaaag
gtgcatctgaaggagctgagccaagagcgagagcagctgaggggaaaggtgctggagctc
aacaagagagtggatcagctgagccaggggatccaggaggctcggaccacggagaggctg
ctggagcagagagcgaagcagctggagagagaaaagcagcaggttgaggaaatgttaaag
gatgtgaggaggaacgaggaggacatgagtcagtcaaaccaatcgctggtcagtcggctg
gaggatgtgcagagtaagttgaccaaactcaatcacgagcacagggacctgaaggagaag
ctgaaggacgagaggaaacaaatggaggagctgtggaagatcaaaactgaactggaggat
gagaggaggatgcaggaccgagcagtggagcaactgcagaggaagatgaatagcatcatg
gaggagtgcgaggcgtccacagacgtccttcagaaccagatcgacgaggccagagagaag
agtcagagggagttggccgagctgcggagacagctgcaggagaagggagcagagctggag
aaatccagacaggcggccaaaaaactgcaggaagagctccttcccctggatgaggagctg
cagcggtgccgtggggagcagcaggaggctcagctgcggggccaggagctggagcagagg
ctggaggagttggacgagaggagcgcagccaccgtggaggagagagagcggcaggtcaaa
ctcatggagggacgaatcagtcacctagtagaagatctcaatgatgagcgcagcagtgcc
gaccgcctgatggagcgattagacaaaaccaaagatcagatggatcagatgaggaacgag
ctgatgcaggagcgagcggtcagacaggacctggagtgtgacaagatgagcctggagaga
cagaataaagacctgaagagcagagtgacccatctggaaggatcacagaggaccaaccag
gattcactggtctccaaactcagcagtcgcatccaggagctggaggagaagctgcaggga
gaagaacaggacaacaacagcctgcaacaagcgaaccgcaagctggagcgcaaagtgaag
gagatgaagatgcaggcggacgaggagcaagtgaacctgcagagccagagagaccagctg
actcagaggctgaagacgtcgaagaggcagatggacgaggcggaggaggagatcgagcgt
ctggagcacagcaaaaagaagctgcagcgagagctggacgagcagatcgaggccaacgag
cagcttcacggccaagtgaccacgctgaggaacgagatgaggcgaaggaagaaatctcct
cctctcatcaaggttgtggaggacgacgggaacgacgtggacgactttggctctgattga
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