Hippoglossus stenolepis (Pacific halibut): 118110006
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Entry
118110006 CDS
T08308
Symbol
ptprz1a
Name
(RefSeq) receptor-type tyrosine-protein phosphatase zeta isoform X1
KO
K08114
receptor-type tyrosine-protein phosphatase zeta [EC:
3.1.3.48
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
118110006 (ptprz1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hsp01009
]
118110006 (ptprz1a)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
hsp00535
]
118110006 (ptprz1a)
Enzymes [BR:
hsp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
118110006 (ptprz1a)
Protein phosphatases and associated proteins [BR:
hsp01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
118110006 (ptprz1a)
Proteoglycans [BR:
hsp00535
]
Cell surface proteoglycans
Others
118110006 (ptprz1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Y_phosphatase
Carb_anhydrase
fn3
Tc-R-P
PTP-SAK
Y_phosphatase3
PTPlike_phytase
PTP-NADK
DSPc
GUN4_N
Motif
Other DBs
NCBI-GeneID:
118110006
NCBI-ProteinID:
XP_035013422
LinkDB
All DBs
Position
5:complement(5920528..6006267)
Genome browser
AA seq
1875 aa
AA seq
DB search
METPGCWLLLAAHLILLYRPAEGYAYRNQRKFSEDIDWSYAGTLNQNNWAKKFPSCSNAK
QSPINIEENLAQVKLQYQKLQFDGWESLTTERTTIKNDGKTVAVDVDGEFYVSGGGLRSK
FKVGRLTFHWGRCNASSDGSEHSLDGVKYPLEMQIYCYEDQRFDSLDESIKAGSKITALA
VLFETTTEDNVNYAPIIDSILSVSRYGKSAEVSPFTLRGLLPNSTEKYFTYNGSLTTPPC
SEIVEWIIFKNKVAISDEQLEMFCEVMTMQQAGYVMLMDYLQNNYREQQEQFMGQVLSSY
TGTEEVLTPVCSSEPENMQAAPYNLSSLLVTWERPRAVYDASIEKYAVSYRLANAEDSVA
SEYLTDGDQDVGAILDDLSANTSYVVKVVAVCTNGLYGRVSDLLTVVMPVDDPENALDPD
SDEFDDESNYEPDPAWIPTNSPKTTTSGSLLLPLPGIRTTTPESAQRRTSTDPLPPVRST
QVGQVLSQTEETARDSTSSQPPEVALSPETIDAELSGNAPIYSTATATAKEFFISTPTTL
SDTKTDGGFGRISPKGVVSTTATTLTSAKTKAVKSISFYSTSATTLRSRTREMSSTTSSS
FIQAETNRGLGHPLNEDTTPDSRGFPEIQMSTSEPSSTEAVTRSPTTSVRLNAVLLQTTK
SVSNGERPTVLPSSSSSSASSPLCDTTDPDKAPSTCLHDPPSSSWPVLSASALDSKHAAT
AALSINDPASPSTPTLAASALPHPPHSSHPLSGRETDSVSPGSDDNDSDGDLLSGSSSSS
FSSGDPLVFRDTPPIQTIPDLSVTTVTAEPSESSWELSLSTISLSLSPTLQPSILLSSDF
TLSGATPGLSHSFSEDSRYATGSTIESFLPEVSGDGFSLGSDMVTMCGCSVEPSASSSWS
SHVPLPSSAWDSASLDLYSSVGHPSASSVGRDDHRSVSVAGSDGLLLDQPLFSHSAILPS
LSLLQSHLLQATHSDLPVSVAATTAGVRDSWFLASDGDTDLHTSALPSSPTATPFTPTPE
GQALDTSSSASGSALFPDSQEGLDQEWDRVQTSASGESALPILTKIASTVPPSTTSASGQ
TPDDLEERSSAFYFESESGSAVTSEVGSTAAPTTPAESLVSPWPLGGEEESGSGQGEGLY
DNETSSDFSIPERTERESEEEEPVADASNSSHESRVGSIRERERKAVVPLAVISTLTVIG
LVVLISILIYWRTCFQTAHFYIEESSSPRVIAAASTAALTSEDLFYIPDEQTAFPVTDFV
QHVAELHNTQGFQQEFEILKESYEEVQVCTVDMGMNTDSSNHPDNKNKNRYSNILAYDHS
RVRLSSQADKDGRTRDYINANYVDGFKKTRSYIAAQGPLKSSTEDFWRMIWEQNIGVIVM
ITNLVEKGRRKCDQYWPTEVQEEYGSFLVTVKSSRVLAYYTQRTFNVRNTHSKKGSQRGR
NSERTVTQYHYTQWPDMGVPEFALPLLSFVRKSSKARAEDMGPLVVHCSAGVGRTGTYIV
LDSMLKQMRDEGSINITGFLKHIRTQRNYLVQTEEQYVFIHDALVEAILSGETEVVAAHL
HKYMDELLTPGAAGRTSLDKQFKLVCPPEAKQCDYSTALQECNLCKNRNCSVIPVERSRV
RLSTSAGETSDYINASYIAGYRQSSEFIITQNPLPGTIKDFWRMIWDHNAQVIVSLQGAS
TIGTEEEAELCIFWPRKGHPIRYEMFTITLRSEDHVCLANEDMLVVQEYVLEATQDDFVL
EVKHYRAPCWPNPDGPVSNTFELLNLVKEDCAAKDSPTVVNDDVGGVTAGTFCTLLSLTR
QLEAEGSVNIFQVAKLTNLMRPGIFSDIEQYQFLYKAMLSLIGTQEDKEALQSSDINGTI
VVGTASTAESLESLV
NT seq
5628 nt
NT seq
+upstream
nt +downstream
nt
atggagactccgggctgctggctgctcctggctgcacatctcatcctcctctaccgacca
gctgaaggatatgcttacagaaatcaacgcaagttctcagaagacatcgactggtcatac
gcaggaacattaaaccaaaacaactgggccaagaagtttccatcttgcagcaacgccaag
cagtctcccatcaacatcgaggagaacctggctcaggtgaagctgcagtaccagaagtta
cagtttgacggttgggaaagtctgacaaccgaaaggaccaccatcaagaatgatggcaag
accgtggcggtggatgtggatggagagttttatgtaagtggaggaggcctcaggtcaaag
ttcaaggtgggacgtctgacgttccactgggggcgctgcaatgcctcctcagacggctca
gaacacagtttggatggagtcaaataccctctagagatgcagatctactgttacgaggat
caacgcttcgactccctagatgaatccatcaaggctggaagcaaaatcacagcactcgct
gtgctgtttgagacgaccactgaagacaacgtgaactacgcaccaatcatagacagtatc
ctcagtgtgagcagatacggtaaaagcgctgaggtttcgcccttcaccctccgaggtctc
ctgccaaactccacggagaaatatttcacctacaacggctctctgaccacacccccctgc
agtgagattgtcgagtggatcatcttcaagaacaaagtcgcgatctctgatgaacagctg
gagatgttctgcgaggtgatgacgatgcagcaggccggatacgtgatgctgatggactac
ctgcagaataactacagggagcagcaggagcagttcatgggacaggtgctctcctcctat
accggcaccgaggaggtcctcacaccagtctgcagttcagagccggagaacatgcaggca
gcgccctacaatctcagcagcctgctggtgacgtgggagcggccgcgggcagtgtacgac
gccagcatcgagaaatatgccgtcagctaccgactggccaacgcagaagactctgtcgcc
tctgagtacttgactgatggagaccaggatgtgggggcgatacttgatgatctgtcagcc
aacaccagctacgtggtcaaggtggtggcggtctgcaccaatggtctgtatggacgagtg
agcgacctgctgacggtcgtcatgcccgtcgatgaccccgaaaatgctctggatccagat
tcagatgaatttgatgatgagagcaactatgaacctgatccggcctggattcctacaaat
tcaccaaaaaccaccacttctgggtcccttcttttacctttacctggcattagaaccaca
actccagagtcagctcaaagaagaaccagcactgatccgcttccccctgtcagatccaca
caggttggtcaggtcctgagccaaacggaagagacagcacgtgacagtacctcctcacag
ccaccagaggtcgccctatcaccagaaacaatagatgctgaattaagtggcaacgctcct
atttactccactgccacagcaacagccaaggaattcttcatctccactcccactactctt
tccgatacaaagacagatggtggttttggacgcatcagtccaaaaggtgttgttagtacg
acagctactacattaaccagtgcaaagacaaaagctgttaaaagtatttcattttacagc
accagcgcaaccacactaaggtctcgtacccgtgaaatgagcagcacgacgtcttcatcc
ttcatccaggccgagaccaaccgaggcttggggcatcccctaaatgaagacactacccct
gacagcagaggttttccagagatccaaatgtcaacctccgaaccttcctcaactgaagct
gtcacacgtagccccacgacctctgtgcgcttgaatgctgttctcttgcagacgacaaag
tctgtttccaacggtgagcgccccactgtcctcccctcctcttcctcctcctccgcctcc
tcccctttgtgtgacactacagacccagacaaagccccctccacctgcctgcatgaccct
ccttcctcatcttggcctgtgttgtctgcctctgctctggactccaagcatgccgctact
gcagcactgtctataaatgacccggcttccccttcaacccctacactcgctgcctccgcc
ctgccccacccccctcactcctcacatcccttgtctggtagggagactgactctgtctcc
cctgggtctgatgataatgatagtgatggtgatttgttgtctgggtcttcatcttcgtca
ttttcctcaggggaccccttagtgttcagggatacccctcctatccaaacaattccggat
ctgtccgtcaccaccgtcactgctgaaccgtctgaatcttcctgggaactatcactctca
acgatctctctgtctcttagccccacccttcagccttcgattcttctttctagtgacttc
accctgtctggtgcaacaccgggcctgtcccactctttctctgaggactcaaggtacgcc
acgggaagcaccattgagtctttcctccctgaggtcagtggtgatgggttttcgttaggt
agcgatatggtcaccatgtgtggctgttccgtggagccgtctgcttcctcgtcctggtct
tctcatgtcccgctgccgtcttcagcctgggactctgctagcttagatctttactctagt
gttggccatccttcagcctctagtgttggtagagatgaccatcgctctgtgtcggtggcg
ggttctgatggtttgctcctagaccagcctctgttctcccatagcgccatcttgccctcg
ttatccttgttacaatcccaccttcttcaagccacccatagtgacctgcccgtttctgtt
gcagccacaacggctggcgtcagggattcctggttcttggcgtcagatggggacactgac
ctccatacctctgccctcccttcctcacccacagccaccccattcacccccactccagag
ggacaggcgttagatactagcagcagtgcctctggttcagctctgttccctgactcccag
gagggcttagatcaggaatgggaccgggttcaaacttcggcctcgggggagagcgcactc
cctattttgaccaaaattgctagcaccgttcccccatctacaacctctgcttctggccag
accccagatgatctggaagaacgctcctcagcattctattttgaaagcgagagtggcagt
gccgtcacctcggaggtaggaagcactgcagctccaaccactcctgctgaatccttggtt
tcaccctggccattgggtggggaggaggagagtggctcagggcagggtgaaggcctgtac
gacaacgagacgtcctctgacttcagtatccccgagcgaacggaaagagagtcggaggaa
gaggaaccagttgcagacgccagcaacagcagccatgagtcaagggtcggttcaatccgg
gagagggagagaaaggccgtggttcctctggcagtcatctccaccctcactgtcatcggc
ctcgttgtcctcatcagcatcctcatatactggaggacctgttttcagacggctcacttc
tacatcgaggagagctcatcgcccagagtcatcgctgcagcatccacagctgcattaaca
tctgaagacctgttttatattccagatgagcagactgcgtttccagtcacggattttgtc
caacacgtcgctgaacttcacaacacccagggcttccaacaggaatttgagatactgaag
gagagctacgaggaggtgcaggtgtgcacagtggacatggggatgaacactgacagctcc
aaccatcctgacaacaagaacaagaacagatacagcaacatcctggcctatgaccacagc
cgggtgcggctctcctcgcaggctgataaagacggaaggacgagagattacatcaacgca
aactacgtggatggttttaaaaagaccaggtcgtacatcgccgctcagggtcctctgaag
tcgagcaccgaagacttctggaggatgatttgggagcaaaacattggcgtcattgtcatg
atcacaaacctggtggagaaaggacgaaggaagtgtgatcagtactggccaacggaggtg
caggaggagtacggcagcttcctggtgacggtgaaaagcagcagagtcctcgcctactac
acccagagaaccttcaacgtcaggaacacccactccaaaaagggctcccagagaggtcgg
aatagtgaacggacagtgacgcagtaccattacacccagtggcccgacatgggtgtccca
gagttcgccctgccgctgctgagctttgtccgcaagtcgtccaaagccagggcggaggac
atggggccgctggtggtgcactgcagtgcgggtgtgggccgaacaggaacctacatcgtc
ctggacagcatgttgaagcagatgagagacgaaggcagcatcaacatcacaggcttcctc
aaacacatccgcacacagaggaactacctggtccagacagaggaacagtatgtttttatc
cacgatgccttggtggaagccatcttgtccggggagacagaggttgtggcggctcacctg
cacaagtacatggacgagctgctgaccccaggggctgctgggaggacgagcctggacaaa
cagttcaagctggtttgtccccctgaggcgaagcagtgcgactattctacagctctgcag
gaatgcaacctctgcaagaacagaaactgctctgtgatacctgttgagagatcaagagtg
cgtctgtctacgtcagcaggggaaacgtcggactacataaacgcatcgtacatcgcaggt
tacaggcagagcagtgagttcatcattacccagaaccctctacctgggaccataaaagac
ttctggaggatgatatgggaccataatgcccaggtcattgtgtcactgcaaggggcatca
acaattgggacggaggaggaggcagagttgtgcatcttctggccccgcaaagggcatcca
atcagatatgagatgttcaccattacactgaggagcgaggatcacgtctgcctggccaac
gaggacatgctggtggtccaggagtatgtgctggaagctacacaggacgacttcgttctg
gaggtgaaacactaccgtgccccctgctggccgaacccagacggtcctgtcagtaatacc
ttcgaactgctcaacctggtcaaagaggattgcgctgccaaggacagtcctactgtagtc
aacgatgatgtgggtggagtcacagcaggaacattttgcaccctattgtctctgactcgc
cagctggaggctgaaggttcggtcaacatcttccaagtggccaaactcacaaacctcatg
agaccaggaatcttcagcgacattgagcagtaccagttcctgtataaagccatgctgagt
ctcatcgggacgcaagaagataaggaagcgctccagtcctctgacatcaacggcaccatc
gtggtgggaactgccagcaccgcagagagccttgaatccctcgtgtga
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