Hippoglossus stenolepis (Pacific halibut): 118110030
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Entry
118110030 CDS
T08308
Symbol
rbm28
Name
(RefSeq) RNA-binding protein 28
KO
K14573
nucleolar protein 4
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
118110030 (rbm28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hsp03009
]
118110030 (rbm28)
Ribosome biogenesis [BR:
hsp03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
118110030 (rbm28)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_10
RRM_occluded
BUD22
RRM_11
Motif
Other DBs
NCBI-GeneID:
118110030
NCBI-ProteinID:
XP_035013464
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All DBs
Position
5:17424771..17431489
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AA seq
826 aa
AA seq
DB search
MPAPQTIFVASLPASASNQRLEEIFSEVGPVKQCFVVREKGTETCRGFGYVTYAMEEDSQ
QAMKTIKDYDGQRISLSVAKQKIKDKKKTAKPPAKEPAEVPGKEPGKEPAKVPAKVPVKV
PAKPPAKVPVKVPAKVSVKVPAKVPTEVPAKAPAPKVNEEGSKGIRKKLLKAKLIIRNLS
FKCSEDDLKQVFSKFGTVLESKIPLKPDGKMRGFAFVLFKNVSQAAKALQSMNLKEIKGR
QVAVDWAIPKDKYLATQQSTSAGNKTTEAATVKQSDPESEPEDEEEEEEEEETKPAPPSK
KKVASKPAVQQVEESQSEDEEDEEDDEDDEEQDSEEEEEEDDDNDDDDNEDDDDEEHDSE
EEDDDDDDDDDDEEEKSAKKKAQNKLLPSDVKEGRTIFIRNLSFDTEEEGLEEVLLKYGE
LNYIKIVLHPDTDHSKGCAFAQFKTKDCADKCIAASEDQAENGGVRVDGRKLLIVAAVTR
EDASKLKVDKVKVESGTRNLYLAREGLIRAGTKAAEGVPEADMIKRTRFEEIKRTKLRDI
SVFVSKNRLCVHNLPKSVDNKKLRELCLEAIKGGKGVRIPECRVMYDKKPEKGKVMGQSL
GYGFVQFQDHENALKTLRYLNNNPDIFGSHKRPVVEFSLEDSRKLKMKELRQQKNKQFTQ
NRPYQGGAKPQAASGGQGPREGGSKPQSSSVLGGKESAPPQNQKKDKLFSGFQTKPEVEH
ISLENGKKRKKVLNLPSHRGPKIRMRDKGKQQVPPPKKAKPGSTRKEPQRRQMEKPMQSR
SQIKAAKQPFKRDGDRFDSLVEQYKKKLMGNSDKSSNVKRNKWFNS
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctcctcagaccatattcgtcgcctctcttccagcctcggcttcgaaccagcgt
cttgaagaaatcttctcagaggtcggtccggtgaagcagtgcttcgtggtcagagagaaa
ggtacagaaacatgtcggggctttggctatgtcacatacgcaatggaggaggattcccag
caagctatgaaaacaataaaagactacgacggacagaggatctctctttctgtggccaag
cagaaaataaaagataaaaagaaaacagctaaaccaccagctaaagaaccagctgaagta
ccaggtaaagaaccaggtaaagaaccagccaaagtaccagctaaagtaccagttaaagta
ccagctaaaccaccagctaaagtaccagttaaagtaccagctaaagtatcagttaaagta
ccagctaaagtaccaactgaagtaccagctaaagctccggctcctaaagtgaacgaggag
ggatctaaaggcatcaggaagaaactactgaaagcaaagctcatcatcaggaacctcagt
ttcaagtgttcagaagatgacctgaagcaggtgttttccaagttcggaacagttcttgag
tccaaaattcccctgaaacctgatgggaagatgcgaggatttgcgttcgtcttgtttaaa
aacgtgtctcaggcagcaaaagctcttcagagcatgaacctgaaggagataaaagggagg
caggtagcagttgactgggctatacctaaggacaaataccttgcgacacagcaatccacc
agtgcaggaaataaaactacagaggcagcaactgtaaaacagtcggacccagaaagtgaa
cccgaagatgaagaggaggaggaggaggaggaggaaacgaaaccagctccaccatcaaag
aaaaaagtcgcctctaaaccagctgtgcagcaggtagaggaatcccaatcagaggatgag
gaggatgaggaggatgatgaggatgatgaggaacaagatagtgaagaggaggaggaggag
gacgatgataatgatgatgatgataatgaggacgatgatgatgaggaacacgatagtgaa
gaggaggacgatgatgacgatgatgatgatgatgatgaagaagagaaatcagctaaaaag
aaagcacaaaataaacttctcccatctgatgttaaagagggcagaacaattttcatcagg
aacctgtcctttgacacagaggaagaaggtcttgaggaagttctcctgaagtacggagaa
cttaactacatcaagatagttctccacccagacaccgaccattccaaaggttgtgcattt
gctcagtttaagactaaagattgtgcagacaagtgcatagctgcatcagaagaccaggcc
gagaatggcggtgtgcgtgtggacggcagaaagctgttgattgtggcagcagtgaccaga
gaggatgcttccaaactgaaggtcgataaagttaaagtagaatcaggcaccaggaacctg
tacctggccagagagggattgatcagagctggaaccaaggctgcagagggtgtacctgaa
gcagacatgatcaaaagaaccagatttgaagaaataaagaggaccaagcttcgggacatt
agtgtgtttgtatcgaagaatcgtctgtgtgtccataacctgcccaagtcggtcgacaat
aaaaaactcagagagctctgccttgaagccataaagggtgggaagggagtgcgcatccca
gagtgtcgggtgatgtatgataagaagccagagaagggtaaggtgatgggacagtcgtta
ggttacggctttgtccagttccaggaccatgaaaatgctctcaaaacacttcgttacctc
aacaacaaccctgatatctttgggtctcacaagagacctgttgttgagttctccctggag
gattcaaggaaacttaaaatgaaggaattgcgacaacaaaagaacaagcagtttacccaa
aatcgtccctatcaaggaggagctaaacctcaggcagccagtggtggacaaggcccgagg
gaaggaggaagtaaaccacagtcgtcatcagtgctgggaggaaaggagagcgctccacct
caaaaccagaagaaagacaaactcttctccggcttccagaccaaacctgaggttgaacac
atttctctggagaatggaaagaaacgaaagaaagttctgaatttaccttctcatcgggga
cctaagatcagaatgcgtgataaaggaaagcagcaagtcccaccacccaagaaagcgaaa
cctggatccaccagaaaagagcctcaaagacgacaaatggaaaagcccatgcagtccaga
agccagattaaagcagctaagcagccgttcaagagggacggggaccgcttcgacagcctg
gtggagcagtacaagaagaagctgatgggcaacagtgacaagagcagcaacgtcaaaaga
aacaagtggtttaatagctaa
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