Hippoglossus stenolepis (Pacific halibut): 118110088
Help
Entry
118110088 CDS
T08308
Symbol
exosc6
Name
(RefSeq) exosome complex component MTR3
KO
K12587
exosome complex component MTR3
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118110088 (exosc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsp03019
]
118110088 (exosc6)
Messenger RNA biogenesis [BR:
hsp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
118110088 (exosc6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
118110088
NCBI-ProteinID:
XP_035013564
LinkDB
All DBs
Position
5:25301339..25303268
Genome browser
AA seq
275 aa
AA seq
DB search
MPTDTKRVRGPEASQSPSLFVSKPAAAASPALGPRADGRRWDQVDVRPVFVRCGLVSQAK
GSAYMEAGSTKLLCCVYGPKETERKDETDMKCGRLTTDMRFAPFSCPERGSWIQGSQDKD
LSQMLHESLQPAVCLQKYPRSQIDVNVMVLENSGSVLAHAVTCASLALADAGIEMYDLVL
GCSIRQDGDSYVVDPSYTEQNSCSSVNSENQGNLTVAFLPSLNQISGLQSDGEMTEETLT
AGVRTCIEGCYKLYPVIQKALAKAVRRAAPPPSES
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccgacaccaaacgtgttcgcggcccggaggcgtcccagagcccgtctctgttc
gtgagcaagcccgcggctgctgcctctccggccctcggcccccgagcggacggccggcgc
tgggatcaggtggacgtccggcccgtgttcgtgcggtgcgggctggtgagccaggccaag
ggctccgcgtacatggaggctggaagcaccaagctgctgtgctgcgtgtacggccccaaa
gagaccgagaggaaggacgagaccgacatgaagtgtggaagattaacaactgacatgcgt
ttcgctccgttttcctgcccagagaggggctcttggattcaggggagccaggataaagac
ttatcccagatgttgcatgagagtctgcagccggcggtgtgcctccagaaatacccccgc
tctcagatcgacgtcaacgtgatggttctcgagaacagcggctcagttctggcccatgcg
gtcacgtgcgcttccctcgctctcgcagacgcagggattgaaatgtacgatctggtgctc
ggctgttccatccggcaggacggcgactcttatgtggtcgacccgtcttacacggagcag
aacagctgcagctcggtcaacagcgagaatcagggaaatctgactgttgctttcctcccg
agcctgaaccagatttctgggttgcagtcggatggagaaatgactgaagagactctgacg
gcaggagttcggacctgcatcgagggatgttacaaactgtacccggtcatccaaaaggct
ctggccaaggctgtacgcagggctgcccccccaccatcagagagctga
DBGET
integrated database retrieval system
