Hippoglossus stenolepis (Pacific halibut): 118110108
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Entry
118110108 CDS
T08308
Symbol
nfatc3a
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 3 isoform X1
KO
K17333
nuclear factor of activated T-cells, cytoplasmic 3
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04010
MAPK signaling pathway
hsp04020
Calcium signaling pathway
hsp04148
Efferocytosis
hsp04218
Cellular senescence
hsp04310
Wnt signaling pathway
hsp04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118110108 (nfatc3a)
04310 Wnt signaling pathway
118110108 (nfatc3a)
04020 Calcium signaling pathway
118110108 (nfatc3a)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
118110108 (nfatc3a)
09143 Cell growth and death
04218 Cellular senescence
118110108 (nfatc3a)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
118110108 (nfatc3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsp03000
]
118110108 (nfatc3a)
Transcription factors [BR:
hsp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
118110108 (nfatc3a)
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Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
TIG
Motif
Other DBs
NCBI-GeneID:
118110108
NCBI-ProteinID:
XP_035013612
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Position
1:complement(20185248..20246871)
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AA seq
1137 aa
AA seq
DB search
MLDYFELPKRVAEGRRQVLVTRRYLGQENPSSPSTSAASDFVLLKHFHDHNEERSGRMLC
ATSPGECVGTPRLKPDLEPDDNTSFYILNVGQPQAMVTNHQSIGLPRHGMQSHSQVINTS
PRLQSHKSGLAHPGYEVQDSKYGSSPLLPSAPMEAPKAFECPSIQITSISPSCQQEIGPN
GEDLRANGPDGDYHGDRPLSRDHLYLRLDHSYRDSSLSPSPCSSLSSRSWFSDASSCESF
SHVYDDVDSELNEAAARFTLGSPLTSPGCASPQTGGGVLEEQPHWQHQHPAFVHHSHSIS
LSPRQSPCHSPRTSVTDENWLSPRPPSRPSSRPTSPCGKRRHSSADICYPVSLSPHHSPT
PTPGPSPRGSVTEDTWVGSPSVGMSPFQCCPSEADIPSKTRKTSQDRTTMQSGKGELGLD
DQGNMSPNLDSPSDEALHSLKKDGPGEQFLSVPSHFSWNKPKPGHTPIFRTSSLPPLDWP
LPSQFGQYDLKIEVQPKAHHRAHYETEGSRGAVKAASGGHPVVKLIGYSEKPVNLQMFIG
TADDRYLRPHAFYQVHRITGKTVATASQEIVVSSTKVLEIPLLPENNMSASIDCAGILKL
RNSDIELRKGETDIGRKNTRVRVVFRVHIPQPNGKVLSLQAPSIPVECSQRSAQELPQVE
KSSLTSCVVSGGEELVITGSNFFPESKVIFLEKGPDGRPQWEVEAKIKREKTQGSCIVVE
VPSYHSKTVGSAVQVQFYVCNGKRKRSQSQRFTYLSVMVKQEHRDELDLPAIPPMSMPLA
HNASLVRTQLPSPEQCHPTDNLLSSSPHGLAAGSGAGLLPLQAPCPSLGSPSFQHLPHLQ
SRSLHHPPADCHMTFHPSSAPAPLPAPPHPSYQHMQHSHGHSLPFNGQSGLPPQGYERMP
FQQSPTAASHPMALGMVYPSSPCSSPSAPSSLSMAGSPQSQQSLLSPSSPHLHTLAGYHC
SPNPTQVSSPSCHPLVGQHSSQLQRALGYHPVGQRSASCPTPSSAPPPRMIPSPHSGPSS
PQLHSLPYQSPTSSSPTSGGSPLGPLQQQPSPQATSPVMASLSPAAVGPLVHPLSPQGPF
PSDSESLNIKQEPEEREPTFRSIGLQDITLDDVNEIIGRDLSQSPSAHGPPSAHNQS
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgctggactattttgagctcccaaagagagtggcagagggcagacgccaggttctagtg
actcgtcggtacttagggcaggagaatccctctagccccagcacgtctgcagcctctgac
tttgtactgctgaagcactttcacgatcataacgaggagaggagtggaagaatgctgtgt
gccacatcgccaggtgagtgtgttggcactcccagactcaagccagatctggagcctgat
gacaacacatcattctacatcctaaatgtgggccagccccaggctatggtcacgaaccac
cagtctattggcctgcctcgtcatggtatgcagtctcactcccaggtcatcaacacttcc
ccacgccttcagtcacacaaatcaggattggctcatccaggctacgaggtacaagactcc
aagtatggctcctcccctcttctgccctctgctcctatggaggcaccgaaggcctttgaa
tgtcccagtatccaaatcacctccatctcccctagctgccagcaggagataggtcccaat
ggagaggatctgagggccaatggcccagatggggactatcacggtgacagacctctatcc
agagaccacctgtatttgcggctggaccactcataccgggactcttcgctcagtcctagc
ccatgcagcagtctctcttctaggagctggttctctgatgcctcctcatgtgaatcattc
tcacacgtctatgatgatgttgactcagagctaaatgaagcagctgcccggtttaccttg
ggctccccacttacttccccaggctgtgcctcccctcaaaccggcggtggagttctggag
gagcagccccattggcagcaccagcaccctgcctttgtgcaccactcccactccatcagc
ctgtcaccgcgacagtcaccctgccactcgccacgcaccagtgtcactgatgaaaattgg
ctcagcccgcggccaccttccaggccatcttcccgtcccacctcaccctgcgggaagagg
cgtcactctagtgcagacatctgctatcccgtctcattgtctccacatcactcacccaca
cccacgccaggaccttcacccaggggcagcgttacagaagacacctgggttggcagtcct
tctgtgggcatgtcgcccttccagtgctgcccatcagaggcagacatcccatctaagaca
aggaagacctcacaggatagaacaactatgcagtctgggaaaggggagctggggctagat
gaccaaggaaatatgtcgcctaatctagactctccctcagacgaggccttgcacagcctg
aagaaagacgggcctggggaacaattcctctcagtgccctcccacttctcatggaataaa
cccaagcctggtcacacacctatattcaggacctcctccctgcctcccttagattggcca
ttgccaagccagtttggccaatatgacctgaagatagaggtacaacccaaagcccaccac
cgagctcactatgagaccgagggcagccgaggagccgtcaaagcagcgtctggtggccac
cctgtcgtcaagctcattggctacagcgagaagcccgtcaacctgcagatgttcattggg
acggcggatgaccgatacttgaggccgcacgccttctaccaggtgcaccggatcaccggg
aaaactgtagccacagccagccaagaaatcgtagtctccagcaccaaggttctcgaaatt
cctctgctgcccgagaacaacatgtcagccagcatcgactgcgccggtatccttaagctg
cggaactccgacatcgagctgcggaagggagagacagatataggaagaaagaacacacgg
gttcgcgtggtgttcagagtgcacatccctcaacctaacgggaaggtgctgtcgctgcag
gctccctccattcctgtggagtgctcccagcgttcagctcaggagctgccgcaggttgag
aaatccagcctgaccagttgtgtggtcagcggtggagaagagctggtcatcacgggctcc
aacttcttcccagagtccaaggtcatcttcctggagaaaggccctgatggacgaccacaa
tgggaagttgaggcaaaaataaaacgtgagaaaactcaaggatcatgcatcgtggtggag
gttccttcctaccacagtaagactgtgggctcagctgtgcaggtgcagttttatgtctgc
aatggcaagcggaaaaggagccaatcacaacgcttcacttacctttcagtcatggtgaaa
caggagcacagggatgagttggaccttcctgcaataccccctatgtccatgcccctggca
cataatgccagtctggtgcgcacccagctgccttctcctgagcagtgccacccaacagat
aaccttctgtccagctcccctcatggcctggctgcaggctctggagctggcctgctaccc
ctgcaggccccttgcccctccctgggctccccatctttccagcacctgcctcacctccag
agtcgcagtttgcaccacccccctgcggattgccacatgacgttccacccgagctctgct
cctgctcctcttcctgctcctccccatccctcctaccagcatatgcagcacagccacggt
catagcctgcctttcaatggccagtccggccttcctcctcagggctacgagaggatgccc
tttcagcagagccccactgcagcatcacacccaatggctttggggatggtgtacccctct
tccccttgctcctcaccatcagctccctcctctttaagcatggctgggtctccacagagt
cagcaatctctgctttcgccctcatctccacatctccacacacttgcaggctatcactgc
tctccaaatccaacccaggtctcttctcccagttgtcacccccttgtagggcagcactcc
tcccagctgcagagggccctgggctaccacccggtaggtcaaaggtcagcctcttgcccc
acaccatccagcgcacctccgccaaggatgatcccctctccgcactccgggccttcctcc
cctcagctccattcgctgccctaccagtctcccacctcctcctcccctacttcaggtggc
agtcctttggggcctcttcaacagcagccctctccgcaggctacaagtccagtcatggcc
agcctgtcccctgcagcagtgggccctctggttcaccctctgagccctcaggggcccttc
ccatcggacagcgagagtctgaacatcaagcaggaaccagaggagagggagcccaccttc
cgctctatcggcctgcaggacatcacgctggatgatgtgaatgaaatcatcggcagagac
ctgtcccagtcccccagtgctcatggtcctccatcagcacacaaccagtcatag
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