Hippoglossus stenolepis (Pacific halibut): 118110131
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Entry
118110131 CDS
T08308
Symbol
rasgrf1
Name
(RefSeq) ras-specific guanine nucleotide-releasing factor 1
KO
K04349
Ras-specific guanine nucleotide-releasing factor 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04010
MAPK signaling pathway
hsp04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118110131 (rasgrf1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118110131 (rasgrf1)
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RhoGEF
PH
RasGEF_N
SOS1_NGEF_PH
GOLGA2L5
MYO6_lever
IQ
DUF641
Motif
Other DBs
NCBI-GeneID:
118110131
NCBI-ProteinID:
XP_035013650
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All DBs
Position
5:complement(15655741..15680755)
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AA seq
1256 aa
AA seq
DB search
MQKGIRLNDGHVTYLGLLAKKDGTRRGCLSKKSSDNTKWHSKWFALLQNMLFYFENESSS
RPSGLYLLEGCICDRAPSPKPSLSAKECLEKQYYFTISFTQENQKALELRTEDVKDSDEW
VAAISHASYRNLATEHESLMQKYLHLLQIVETEKTVAKQLRQQIEDGEIEIERLKSEIAG
LLKDNEKISASPAAAPTDDDAEIKKIKKVQSFLRGWICRRKWKTIIQDYIRSPHAESMRK
RNQVVFSMLDSEAEYVQQLHILVNNFLRPLRMAASSKKPPITHDDVSSIFLNSETIMFLH
QIFYQGLKARIASWPTLVLADLFDILLPMLNIYQEFVRNHQYSLQILAHCKQNRDFDKLL
KQYEAKPDCEERTLETFLTYPMFQIPRYILTLHELLAHTPHEHIERTSLDYAKSKLEELS
RIMHDEVSETENIRKNLAIERMIVEGCEILLDTSQTFVRQGSLIQVPMSEKGKITRGRLG
SLSLKKEGERQSFLFSKHLIICNRGSGGKLHLTKNGVVSLIDCTLLEDPEGTDDESKSDK
SGQDMEHLDFKIVVEPKDSQSFTVILVASSRQEKSAWTSDISQCIDNIRCNGLMMNAFED
NSKVTVPQMIKSDSSLYCDDVDIRFSKMMNSCKVLQIRYASVERLLERLTDLRFLSIDFL
NTFLHSYRVFTTADVVLDKLITIYKKPISAIPARSLELFFASSQNSKLLYGEPPSSPRAS
RKFSSPPPLAITKNSSPNRRRKLSLNIPIITGGKALDLAALSCSSNGYASVYSTISPFSK
TTLDINKLYVSSPVASKIPDEGEDKKDKVEETSACKQDLSVREESDNDPNQSDDGDTEAS
PTKSPTTPKNLKCKNSSEFSLFSYNNGMVMSSCRELDNNRSALSAASAFAIATAGANEGT
PTKEKYRRMSLASTGFPTDQRNGDKEFVIRRAATNRVLNVLRHWVSKHSPDFESNNELKT
KVIVFLEEVMHDPELLTQERKAAANIIRTLTQEDHGDSQITLEDVTQLVGGGKTDSFESH
SALEIAEQLTLLDHLVFKVIPYEEFFGQGWMKNDKNEKTPFIMRTTKHFNDISNLIATEI
LHCEDVVPRVTVIEKWVAVADICRCLHNYNAVLEITSSLNRSSVFRLKKTWLKVSKQTKG
LIDKLQKLVSSEGRFKNLREALKNCDPPCVPYLGMYLTDLAFIEEGTPNYTEDNLVNFSK
MRMISHIIREIRQFQQTAYKIDLQPKVAQYLLDMSSVLDEESMYEASLRIEPKVPN
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagggaatacgacttaatgatggtcatgtcacctacctggggcttttggcgaaa
aaggatggtacgagacggggctgcctgagcaagaagagctcggacaacacgaaatggcac
agcaagtggtttgctctgctgcagaacatgctcttttatttcgagaacgagtccagctct
cgaccctcgggattgtacctgttggagggatgcatctgcgacagggcgccctctcccaaa
ccctcactgtcagctaaggagtgtttggagaagcagtactatttcaccatcagcttcacc
caagaaaaccaaaaggcccttgagttacgcacagaagacgtaaaggacagcgatgaatgg
gtggctgcaatatcacacgccagttacagaaacttggccaccgagcatgaaagtctcatg
cagaagtatcttcatctgcttcagatcgtggagacagagaaaacagttgctaagcaactt
cgacaacagatagaagatggggaaatcgagattgaaaggctcaagtcagagatcgccggg
ctgctcaaagacaacgagaagatcagcgccagccccgcagccgcgccgaccgacgacgac
gccgaaatcaagaagatcaaaaaagtccagagcttcctgcgaggctggatctgcaggagg
aagtggaagaccatcatccaggattacatccgctcgccgcacgcagagagcatgaggaag
aggaaccaggtggtgttcagcatgttggactcagaggccgagtacgtgcagcagcttcac
atcctggtcaacaacttcctgaggccgctccgcatggccgccagctccaagaaacccccc
atcacccacgatgatgtcagcagcatattcctcaacagtgaaactatcatgttcctacat
cagatattttaccaaggtctaaaagccagaatagcgagctggccaaccttagtgctggct
gacctgttcgacatcctgctgcccatgctgaacatctaccaggagtttgtgaggaaccac
cagtacagcctgcagatcctggctcactgcaagcagaaccgggacttcgacaagctgctg
aaacagtacgaggccaagcccgactgcgaggagcggaccctggagaccttcctcacctac
cccatgttccagattccccgctacattcttacactccacgaacttctggcccacacgccc
cacgaacacatagagaggaccagtctggactacgcaaaatcaaagctagaagagctctcc
agaatcatgcacgatgaggtcagcgagacggagaacatcaggaagaacctggctatagaa
cgaatgatcgtggagggctgcgagattctcctcgacaccagccagacatttgtacgacaa
gggtctctcatccaggtgccgatgagcgagaagggcaagatcacccgtgggcgactgggc
tctctgtctctgaagaaggagggggagcggcagagctttctcttctccaagcatttaatc
atctgcaacaggggttctgggggaaagcttcatctcaccaagaatggagtcgtctcgctt
atagactgcactcttctggaggaccctgaggggacagatgatgagtccaaatcagacaag
agcggccaggacatggagcacctggacttcaagattgtcgtggagccaaaggacagtcag
tcgttcacagtcatcctggtggcctcctccaggcaggagaagtctgcgtggaccagtgac
atcagccagtgcatagacaacatccggtgcaatgggctgatgatgaacgcctttgaggac
aattccaaagtcacagtgccacagatgatcaagtcagattcaagtctgtactgcgatgat
gtggacatccgcttcagtaagatgatgaactcctgcaaggtgctgcagatccgctacgcc
agcgttgagcgcctgctggagagactgaccgacctccgtttcctctccatcgacttcctc
aacaccttcctgcactcgtatcgtgtgttcaccaccgccgatgtggtgctagacaaactc
atcaccatctacaagaagcccatcagcgccatccctgctcggtcccttgagttattcttt
gccagcagtcagaacagtaaactcctgtatggagaacctcccagctccccgagggccagc
agaaagttctcctcccctcctcctcttgccatcaccaagaactcatccccgaaccggcgg
cgcaagctctccctcaacatccccatcatcaccgggggcaaagctcttgacctggctgcc
ctcagctgctcctcaaacggctatgcaagtgtgtactcgaccatttcgccattcagcaag
accaccttggacatcaataagctttacgtgtccagccccgtcgcgagcaaaatcccagac
gagggcgaggacaagaaagacaaggtggaggagacctcagcgtgcaaacaagatctgtca
gtgcgagaggaaagcgacaacgatccaaaccagagtgacgatggggacacagaggcttct
cccacaaagtcaccgaccaccccaaaaaacctaaaatgcaaaaactcctcagagttctct
ctgttttcctacaataatggcatggtgatgtcctcatgtcgagagctggataacaaccgc
agtgccctgtctgctgcctccgcctttgccatcgctacagctggagccaatgagggcaca
ccaaccaaggaaaaatatcgacgcatgtccctcgccagcactggtttcccaaccgatcag
agaaatggagacaaagagtttgtgatcagacgagcagcgaccaacagggttctgaacgtc
ctgagacactgggtgtccaaacactccccggactttgagagtaacaatgagctgaagaca
aaggttattgtcttcctggaggaagtgatgcacgaccctgagctgttgactcaagagagg
aaagcagcagccaacatcatcaggactctaactcaggaagatcatggggacagtcagatc
accctcgaagacgtgacacaactggtgggaggagggaagaccgactcctttgagagtcat
tctgcattggagatcgcagagcagctcactctcctggaccacctggtgtttaaggtcatc
ccatatgaggaattctttggacaaggctggatgaagaacgacaaaaatgagaagactccg
ttcatcatgagaacaacaaagcacttcaacgatataagtaaccttattgccacagagatc
ctgcactgtgaggatgtggtcccaagggtcacagtcatcgagaaatgggtggccgtggcc
gacatttgtcgttgtctccataactacaacgccgtgctcgagatcacctcctccctcaac
cgcagctctgtctttcgcctcaagaagacctggctcaaggtttcgaagcagacaaaaggg
ttgattgacaagctgcagaagctggtgtcatcagaggggcggttcaaaaacctgagagag
gctttaaagaactgtgacccgccctgtgtgccctacctggggatgtacctcactgacctg
gctttcatcgaggagggaacgccaaactacacagaagacaacttggtcaacttctcgaag
atgaggatgatttcacacatcatcagagaaatcagacagtttcagcaaacagcatacaag
attgacctgcaaccaaaggtagcccaatatctactggatatgagctctgttctggatgaa
gaaagcatgtacgaagcctcactcagaattgagccaaaagtgcccaactga
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