Hippoglossus stenolepis (Pacific halibut): 118110170
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Entry
118110170 CDS
T08308
Symbol
itga11a
Name
(RefSeq) integrin alpha-11a
KO
K06587
integrin alpha 11
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04510
Focal adhesion
hsp04512
ECM-receptor interaction
hsp04810
Regulation of actin cytoskeleton
hsp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118110170 (itga11a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118110170 (itga11a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
118110170 (itga11a)
04810 Regulation of actin cytoskeleton
118110170 (itga11a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hsp04515
]
118110170 (itga11a)
Cell adhesion molecules [BR:
hsp04515
]
Integrins
Integrin alpha subunits
118110170 (itga11a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
VWA_2
Integrin_A_Ig_1
FG-GAP_3
Integrin_A_Ig_3
FG-GAP_2
Motif
Other DBs
NCBI-GeneID:
118110170
NCBI-ProteinID:
XP_035013712
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Position
1:complement(6730331..6772908)
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AA seq
1202 aa
AA seq
DB search
MHMHACTGKHMEYYCFILLWICSQQLGFHDCFNIDTKKHRIIKGPKQAQFGYTVQQHVGA
GGEKWLLVGAPYEMNGPYQTGDVYKCSLSKRTNGNGCSKLNLGRISLTNVSERKDKMRLG
MTLTSNPKDNSFVACGPLWSYECGSSYYSTGICSRVNASFKFSRTIAPAFQRCETYMDIV
IVLDGSNSIYPWYEVQAFLINILQKFYIGPGQIQVGVVQYGEKVVHEFKLSDYKSVEEVV
KRARSIDQRGGEETNTALGINTARSQAFKQGGRRGAKKVMIVITDGESHDSPDLQQAIED
SEKDGITRYAIAVLGYYNRRGINPEAFLNEIKYIASDPDDKHFFNVTDESALKDIVDALG
ERIFSLEGTSKNGTAFGLQMSQAGFSAHNVEDGILVGAVGAYDWNGAVLKETRQGKVVPP
KSSYAEEFPEELKNHGAYLGYTVTSVVSAKHGRLLVAGAPRFNHTGKVIIFTLKNSGNLT
IQHSLKGQQIGSYFGSEIAPLDIDGDGITDNLLVAAPMFFSGGMEKGKVYIYRVTDLNRF
ILEGTLEIHKDGQNARFGTSLAPVPDLNGDGFNDLVVGAPLEDEHKGAIYVFFCQQNRII
RKYKQRIAAADLAPGLQYFGRSIHGTMDMNNDGLVDLAVGSLGAAVLLWSQSVVRIYATI
RFEPSKVNIFVKDCQRGGKDVTCMSAIVCFNITARTAILPTQEIGIKYNVSIAERRFNPR
AVLDNPNVLQPQNLTLLPGEETCQHIYFHVMETTDYARPIIFTVQVGLRDPEQGPVLDDS
WPTVVRTELPFWNGCDEDDRCIPDLALQSMSDLMTRTQFCAQPVQSRGAFCRHFSEREME
GSLRVLEGNRRRMVVDLRLENKGENAYNARLNISYSHNLRFSSLIVKDNSDIKIECLIED
KLRNEKICNVSAPFMRAKSQVSFRLEFEFSRTVFLEHVRVILEASSDGEEMSTADNFNDI
YYSLKYEGDLLFTRDSNPTRCDIKSELSLEEPGVTGPPVNFTFQIQNLGYFPVKDLQLNI
EIPEMTKNGNQLLQISDFHIDQRDGTHCLPPQHVAESRASPEDLTRFSRLNRSNTLTLPI
QCSINVASHREIAVRITGALRIDTLHALKFKILELVTSASVELPSSSPMFLHEERPVRHI
ILEIRKEGDYRIPTWIIVGSTLGGLLLLALLSLALWKLGFFRRQKRRDDDEPPVNGKVAE
ER
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atgcacatgcacgcttgcaccggcaaacatatggagtactactgcttcatcctgctctgg
atctgcagccagcagttaggattccatgactgcttcaatattgacacgaagaaacacagg
ataattaaaggccctaaacaagcccagtttggatacactgtgcaacaacatgtgggtgct
ggaggagaaaagtggttattagtgggagccccgtatgaaatgaatggcccttaccagaca
ggggatgtttataaatgttcactgagcaaaagaaccaatggcaacggttgctccaagctc
aacttaggaaggatatctctgaccaacgtatcagagcgcaaagacaagatgaggctgggg
atgacgctcacatccaaccccaaagacaacagctttgtggcctgtgggccgctgtggtcc
tacgagtgtggcagctcttactacagcacaggcatatgctcccgagtcaatgcgagcttc
aagttctctagaacgatcgcgcctgcctttcagagatgtgagacctacatggacatagtt
attgttctggacggctcaaactccatttacccctggtatgaagtgcaggcttttctcatc
aacatccttcagaagttttatattggaccaggtcaaatacaggttggagtcgttcagtac
ggtgagaaggtcgttcatgaattcaaactcagcgactacaagtcagttgaggaagtggtg
aaaagagcacgaagcatcgaccaacggggcggcgaggagaccaacacggcccttggcatc
aacacagcacgctcacaagctttcaaacaaggaggtcgacgcggtgccaagaaggtgatg
atagttataactgacggagagtcacacgacagtccagatctccagcaagccatcgaggac
agtgagaaggacggaatcacacgttatgccatcgctgtcctcggctattacaaccgtaga
ggaataaaccctgaggccttcctcaatgaaatcaagtacatcgccagcgacccagatgac
aaacacttctttaatgtgacggacgagtcagcactgaaggacatcgtggatgctcttgga
gaacgcatcttcagcttggaaggaaccagtaagaatgggacagcgtttggcctccagatg
tctcaggctggattttccgcacacaacgttgaggatgggattctggtgggtgctgttggg
gcttatgattggaacggagcagtgctgaaagaaacacgtcaggggaaggtggtccctccc
aagtcctcctacgcagaggagttccctgaagagctcaaaaaccatggtgcctacttgggt
tacactgtgacgtctgtggtgtcagccaaacatggtcgtctactcgtagccggagctcca
cgattcaaccacacgggcaaagtcatcatcttcactctcaagaactcaggcaacctgacc
atccagcactccctcaaaggccagcagattggttcctatttcggcagtgagattgcacca
ctggacattgatggggatggcatcactgacaaccttttagtggcagcgccgatgttcttc
agtggcggcatggagaagggaaaggtctacatctacagagtgacagacctgaatcggttt
attcttgaagggacgttggaaatccataaagacggccagaacgcccgctttggtacgtcg
ctcgctcccgtccctgatctaaacggtgatggcttcaacgacttggtggtgggagcgcca
ctggaggacgagcacaaaggagccatttatgttttcttttgccagcaaaacagaataata
cgcaaatacaaacagaggatcgccgcagcagatttggctcccggcctgcagtactttggg
cgcagtattcatggcacaatggacatgaacaatgacggcttagtggacctggcagtaggt
tccctcggtgcagctgttctcctctggtcacagagcgttgtccggatatatgccaccatc
aggttcgagcccagtaaggtcaacatcttcgtgaaggactgtcagagaggtggtaaagac
gtgacctgcatgtcagccatcgtgtgtttcaacatcaccgccaggacggccattctgccc
acacaggaaattggaatcaaatataacgtctccatcgctgagagacgtttcaatcctcgg
gccgtactggacaaccccaacgtgctccagcctcagaacctgacgctgcttcctggagag
gagacctgccaacacatctatttccacgtcatggagaccacagactatgcaagacccata
attttcactgtacaagttggtctgcgagatccagagcaaggaccagttctcgacgacagc
tggcctactgttgtgaggactgagctgcccttctggaatgggtgtgacgaggatgaccgc
tgcataccggacctggcactgcagagcatgagtgacctgatgactcgaactcagttctgt
gcgcagcctgttcagtctcgtggggctttctgccgccacttcagtgaacgagagatggag
ggatctctgcgggtgctggagggaaacaggaggaggatggtggtggacctccggctggag
aacaaaggagagaacgcctacaatgctcgcctcaatatctcctactcacacaatcttcgc
ttctccagtctgatagtgaaggacaactctgacatcaagattgagtgtttgatcgaggac
aaactcaggaatgagaagatctgcaacgtcagtgctccgttcatgagggccaaatctcag
gtctcgttccgcctggagtttgagttcagtcgtaccgtctttctggagcacgtcagggtc
atcctggaggccagcagcgacggcgaggaaatgagcacagctgataacttcaatgacatc
tattactctctgaaatacgagggagaccttctcttcactagggattcaaatccgacccgg
tgtgatatcaaatcagagctgtcgctggaggagcctggagtcactggccctcctgtcaac
ttcactttccagatccagaacctcggctactttccagtgaaagatctacagctgaacatt
gagatcccagaaatgacgaaaaatgggaaccaactcctgcagatatctgacttccacatt
gatcagagagatggtactcactgtttaccacctcagcatgtggcagagagcagagcgtca
cctgaggacctcacacgcttctcccgcttgaaccgatccaacaccctgactctgccgatc
cagtgctccatcaatgtggcttcccaccgagaaattgcagtcagaatcacaggagcgcta
cgaatagataccttacacgcactgaagtttaaaatcctggagctggtaaccagtgcatcg
gtggagctgccctcctccagccccatgtttctacatgaagagaggcctgtcagacatata
atattggagatcaggaaggagggcgattacaggatccccacctggatcatcgttggcagc
acgttgggaggactcctgttgttagccctgctcagtctcgctctgtggaagctcggcttc
ttccggaggcagaagagaagagacgacgacgagccgccagtgaacgggaaggtggcagaa
gagcggtaa
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