Hippoglossus stenolepis (Pacific halibut): 118110190
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Entry
118110190 CDS
T08308
Name
(RefSeq) CUGBP Elav-like family member 2 isoform X1
KO
K13207
CUG-BP- and ETR3-like factor
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsp03041
]
118110190
Spliceosome [BR:
hsp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
118110190
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RNA_bind
RRM_7
RRM_5
Motif
Other DBs
NCBI-GeneID:
118110190
NCBI-ProteinID:
XP_035013746
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Position
5:11539155..11569481
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AA seq
554 aa
AA seq
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MLEHSSELALVQSLYANSMRCPPSAAGISVRNEDLPMSNGSKMNGSLEHLDQPDPDSIKM
FVGQIPRSWSETELKELFEPYGAVHQINILRDRTQNPPQSKGCCFVTFYTRKAALEAQNA
MHNIKTLSGMHHPIQMKPADSEKTSAVEDRKLFIGMVSKKYGENEIRMMFSSFGQIEECR
ILRGPDGQSRGCAFVTFATRAMAQNAIKTMHHSQTMEGCSSPLVAKFADTQRDKEQRRLQ
QQLVQQIQQLNNASTWGNLAGLGTLTPQYLATALDGNAEASLFNRYNLVGCNTVNLLLQQ
ATSTSNQSSFNGMQRLGAGVNPLQLQNLATLAAAAAAAQSSGSPNSNALSASAGALGALG
GQVCSSASSAGAAMSTLASLGTLQGLTGTSMGLNSLNALTGGVSGMAAMNGGLGASMANG
SAASSMDALTQAYSGMQQYTASALPSLYSQSLLQQSIAGNQKEVGPEGANLFIYHLPQEF
GDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRL
KVQLKRSKNDSKPY
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgttggaacactcttctgagctggctctggtgcagagtttgtatgccaacagcatgcgc
tgtcccccctctgcggctgggatctctgtcaggaatgaggacctgcctatgagcaacggc
agcaagatgaatgggtcgctggagcatttggaccagccagaccctgactccatcaagatg
tttgtgggacagattccacgctcctggtcagaaacggaacttaaagagctttttgagccc
tatggagctgtgcatcagatcaacatcctccgcgatcgtacacagaatccccctcaaagc
aaaggatgctgttttgtaactttttatacaagaaaggctgcactggaggcccagaatgca
atgcacaacataaagaccttaagtgggatgcatcatcctatccagatgaaacctgcagac
agtgagaaaacaagtgcggtagaagacagaaaactcttcatcggaatggtttcaaagaaa
tacggcgagaatgagatcagaatgatgttctcgtctttcggccagattgaagagtgccga
attctccggggaccagatggtcagagcagaggctgtgcgtttgtcacatttgctaccagg
gcaatggcacagaatgcaatcaaaaccatgcatcactctcagactatggagggctgttcc
tcacctttggtagcgaagtttgccgacacacagagagataaggagcagaggcgcctgcaa
cagcagctagtacagcagattcagcagctcaacaatgcctccacctggggaaacctggct
ggcctggggaccctcacaccacagtacctggctactgcactggatgggaatgcagaagcc
agtttgtttaacagatacaaccttgtaggctgtaatactgtaaacttattgctccagcag
gccacatctaccagtaatcaaagcagcttcaatggtatgcagagactaggagcaggtgtg
aatccccttcagctgcagaacttggccacattagctgctgcagcggctgcagctcagagc
tctggcagcccgaattccaacgccctgtctgcaagcgctggagccctgggagctctgggc
ggtcaagtttgttcatcagcctccagcgctggtgctgctatgagcaccttggcatcgctg
ggcaccctgcagggtctcactgggacctctatgggcctcaatagccttaacgctctcacc
ggtggcgtcagtggtatggcggccatgaacggcggcctgggagcctccatggctaacggg
tcagcagccagctccatggacgctctgacccaggcctactcagggatgcagcagtacaca
gcctccgctctgccctccctctacagccagtccctcctgcagcagagtatcgctggcaac
cagaaggaagtagggccagagggcgccaacctgttcatctaccacctgccccaggagttt
ggggaccaggatcttctgcagatgttcatgccttttggaaacgtggtctctgccaaagtc
ttcatcgacaaacagaccaatctgagcaagtgctttgggttcgtcagctatgacaatcca
gtgtctgcgcaggctgccatccaggccatgaatggtttccagattggaatgaagaggctg
aaggttcagctgaagcgctccaagaacgacagcaaaccctactga
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