Hippoglossus stenolepis (Pacific halibut): 118110364
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Entry
118110364 CDS
T08308
Name
(RefSeq) calcium-responsive transactivator isoform X1
KO
K15623
protein SSXT
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118110364
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsp03036
]
118110364
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
118110364
GBAF(ncBAF) complex
118110364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
118110364
NCBI-ProteinID:
XP_035013921
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Position
6:7886769..7895258
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AA seq
411 aa
AA seq
DB search
MSVAFSSARPRSKGEVTQQTIQKMLDENHYLIQCIMDYQSKGKTAECTQYQQVLHRNLVY
LATIADSNQNMQSLLPAPPTSSTPMGPGGMGPSGGHAPSNLNDTMAPGLAPTSMMQSQMS
NGSSHAPMQQQSGQTQSALPSTSLSLPASSYVGSASSSASGYSHAAPSSQGSMIQSPGYG
SSSSSSSSSSCSNLNMQSNQVSMMHQQSATPQYSSAQAGGQHYQGQQAMGMMGQGSQGNS
LMTQRPIGSYRSSQQGSAQQHMGQDEFYGEQYGHTQSSSEPKNQQYYPDGHGEFSYQQSS
YGEQGYDRSFDETSQHYYEGGNSQYSQQQAQYQQSSGQQQSFSQQQYSSQQGYTGQPQGY
GPGQGGSSQYAQYQQGQSQQYGSYRSSQGGPGAQTQRPYAYEQGQYGNFQQ
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggcgttttcgtcggcgcgccccaggagtaaaggggaggtgacgcagcagacg
atccaaaagatgctggatgaaaatcattatttaatacaatgtataatggactaccaaagc
aaagggaagacagctgaatgcacacagtatcagcaggtcctgcacagaaacctcgtctac
ttggccacgatcgcagattcaaatcagaacatgcagtcacttctacctgcgcctcccact
tccagtacgccaatgggtcctggagggatgggtccgagtgggggacacgctcccagcaac
ctcaacgacaccatggcaccaggactggcccccacatcgatgatgcagagccagatgagc
aatggctccagccatgcccccatgcagcagcagtcgggtcagacgcagtcggcccttccc
tcgacatccctcagcctgccagccagcagttacgttggctcggcctcttcctcggcctcc
ggctacagccatgctgcaccctcctcccagggcagcatgattcagagccctggttatggc
tcttcctcctcctcctcttcctcctcctcctgcagcaacctcaacatgcagtccaaccaa
gtctccatgatgcaccaacaatctgccactccgcagtactcctcagctcaggctgggggc
caacactatcagggacagcaggccatgggcatgatgggtcagggcagtcaaggaaacagt
ttgatgactcagaggcccattggatcctaccgctcttcacagcaaggatctgcacagcag
cacatgggacaagacgagttctacggagagcagtatggacacactcagagctccagcgag
cccaaaaaccagcagtattaccctgatggtcacggagagttctcatatcaacagtcttca
tacggcgagcaaggctacgaccggtcattcgacgaaacctcacagcactactacgaagga
ggtaactctcagtacagccaacagcaagcccagtatcagcagagctctggccagcagcag
tccttcagccaacagcagtactcgtctcaacaaggctacacaggacagccacagggatac
gggcctggccagggtggatcctcccagtatgcacagtatcaacagggtcaaagccaacag
tatggttcctaccgctcgtcccagggaggccctggagcacagacacagaggccctacgct
tatgaacagggtcagtatgggaattttcagcaataa
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