Hippoglossus stenolepis (Pacific halibut): 118110540
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Entry
118110540 CDS
T08308
Name
(RefSeq) DDB1- and CUL4-associated factor 1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
hsp01001
]
118110540
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsp04121
]
118110540
Enzymes [BR:
hsp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
118110540
Protein kinases [BR:
hsp01001
]
Serine/threonine kinases: Other
Other
118110540
Ubiquitin system [BR:
hsp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
118110540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
WD40
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
LisH
Motif
Other DBs
NCBI-GeneID:
118110540
NCBI-ProteinID:
XP_035014274
LinkDB
All DBs
Position
6:9276383..9290715
Genome browser
AA seq
1545 aa
AA seq
DB search
MASASASVDSKAELTALLEQWEREQQGSTQELVSILTKISELVEKETEEYHKADPDPFDD
RHPGRADPECVLGHLLKILFKNDDFMNALVNSYVMTSREFSLNAAACRLLQNIMPGLETA
VVFQEKEGIVERLFKWAQEAEQPLRIYATGLLAGAMENQDIAANYREENSVLVPLMLHRL
RELQDKDAENKREIKRPSPRKSLSEPLLPLDEETVDGGFEEKPFMLGRNGAEREGTGPEG
DGEIPFSAIEPENELSFRLNSPHKASSHANSAVKTMMKPMSAPSSLLHPGISDGSSYLKR
KADRELGRTSKQKLNFSLPDPERNFSELSNSSWSEMSPWVIGNNYHLYPLTPEIEQRLIL
QYLTPLGEYQELLAVFMQIGARELLMHYMDLKQTNDVQLTFEALKYLASLLLHKKFAAEF
VAHGGVQKLLEIPRPSMSATGVSLCLYYLAYNQDAMERVCMLPHSILSDVVGYTLWLLEC
SHASGCCHATMFFSISFSFRAVLELFDRQDGLRRLVNLISTLEILNLEDQGALLSDDEIF
SSRQTAKHTCMALRRYFEAHLAIKVEQVKQSLQRTEGGAPIHSQPYYKAVSYTREQVVEM
MEFLIEYGPLRLYWEPAEVFHKLSCVQLLLQLISIACDWRTYYGRSDTVRYALDILSILT
VVPKTQLLLSEAVAVLDEGGSTVSTVGISIVLAVAEGEVFVNDAEIQKSALQVVINCVCA
PDKRMSSIGKFIAGTPRRRLPQQTKASESVLTKMWNVVQSNNGIKVLLSLLTVKMPITDA
DQIRALACKALVGLSRSSSVRQIISKLPLFSSGHIQQLMKEPLLQDKRSEHVKFCKFAAE
LIERISGKPLMIGTDVSLAWLQRASVVAQSRITFPEKELLLLIRNHLVAKGLHDTATILT
KEAELPTACLSLTSLSTSAFPSVAPPPPATPVATLPRTPRLANGVGSRLVNHPSLSSTPG
SSHPQTRPSTSQSTGSSSTAFPSTSVPLCSNGSPLIGRIVFSRERQAGCPVVSSKKPRVL
RQKSDHGAFSQSPAMKKQFDRLLPSPPALDGIITEYLREQHARCKNPVATCPPFSLFTPH
QCPEPKQRRQAPINFTSRHTRRVIYPKYGGVDGGCFDRHLIFSRFRPISVFREADEDESG
FMCCAFSARERFLMLGTCTGQLKLYNVFTGQEEASYSCHSSAITHLEPSRDGSLLLTSAS
WSYPLSALWGMKSVFIMKHSFLGDHYVEFSKLSQDRVIGTKEHVARIYDIQTGQVTLTLN
NPDLANNYKRNCATFNPTDDLVLNDGVLWDVRTAQAIHKFDKFNMNISGVFHPNSLEVII
NTEIWDLRTFHLLHTVPALDQCRIVFNNNGTVIYGAMLQADDEDDMMEMQMKSPFGSSFR
TFNATDYKPIATIDVKRNIFDLCTDTKDCYLAVIENQDSFNTDTVCRLYEVGRQRLAEEE
EEDEEDQEDDDQEEDDDDDDDSDDDIDTDPLIAELENGGEDEDDEEEDDGNEEFSPSDEE
VARLLEVDDDDNDDDDSDNDVDLDGDNDSSDNSDLEDDIMLSLNE
NT seq
4638 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagcatctgccagcgtagactccaaggcagagctgactgctctactggaacag
tgggagagagaacaacaaggcagcacccaggagctggttagcatcctcacaaaaatctct
gagcttgttgagaaggagacagaggagtaccacaaagcagacccagacccttttgatgat
cgacatcctgggagagctgatccagagtgtgtgttgggacacctgctcaagatcttgttc
aagaatgatgacttcatgaacgcactggtgaatagctatgtgatgaccagcagagaattt
tccctcaatgcagcggcttgtcgtctgcttcagaacatcatgcctggactggagacagca
gtggtctttcaagaaaaggagggtattgttgagcgtctttttaagtgggcccaggaggca
gagcagcccctcagaatctatgccacaggcctgttggctggtgccatggagaatcaggac
attgcagccaactacagggaggagaactctgttttggtgcctttgatgctgcatcggtta
cgtgagcttcaggataaggatgctgagaacaaaagggaaatcaaacggcccagccccagg
aagagtttgagtgagcctctgctacctttagatgaggagactgtcgacggaggctttgaa
gagaagcccttcatgctgggcagaaacggagctgaaagggaggggacggggcccgagggg
gatggagaaattcccttctcggccattgagcctgaaaacgagctttcgttccgtctcaac
tcccctcacaaggccagcagccatgccaactccgctgttaaaaccatgatgaagcccatg
tctgccccaagttcactgttacaccctggcatttcggatggcagcagttacctaaaaaga
aaggcagacagggagcttggcaggacctcaaaacagaagctaaatttctctttgccagat
ccggagaggaacttcagcgagctctccaacagcagctggtccgaaatgagcccctgggtg
ataggcaacaactaccatctgtaccctctgaccccagagatcgagcagaggctcatcctg
cagtatctcactcctctgggggagtatcaggagctgttggcagtgttcatgcagattgga
gctcgcgagctactcatgcattatatggatctaaagcagaccaatgatgtgcagctcacc
tttgaggctctcaagtacctggcatctttgctgctgcacaagaagtttgctgctgagttt
gtggctcacggaggagttcagaagttgctggaaatcccccgaccgtcgatgtcggccacc
ggagtgtctctgtgtctctattacctcgcctataaccaggatgcaatggagagggtgtgc
atgttgccccactccatcctgtccgatgtggttggttacacgctgtggctgctggaatgc
tcgcatgcatccggctgctgccatgccacaatgttcttttccatctccttttctttccgt
gctgtcctggagcttttcgacaggcaggacgggctccggcgccttgtcaatctgattagc
acactggagatcctgaaccttgaggaccagggagcgctgctgagtgatgatgagattttc
tccagcaggcagacggccaagcacacctgcatggccctgcgcaggtactttgaggcccat
ctggcaatcaaggtggagcaggttaagcaatccctgcagcgcacggaggggggtgccccc
attcactctcagccatactacaaggcggtcagctatactcgtgaacaggtggtggaaatg
atggagtttctgatagagtacggaccactgcgactttactgggaaccggctgaggtcttc
cacaagctgtcgtgtgttcagctcctcctacagctcatttccattgcctgtgactggagg
acctactatggcaggagtgatacagttcgttatgccctcgacatcctgagtattctaaca
gttgttccaaagacccagctgttgttgtctgaagctgttgctgtgcttgatgaaggagga
tccactgtttccaccgtaggaatcagtatcgtcttggcagtggcagagggagaggtattt
gtgaatgatgccgagattcagaagtcggctttgcaggttgtcatcaactgcgtctgtgct
ccagacaaacgcatgtccagcattggcaagttcattgcaggcaccccccgccgccgcctg
ccccagcagaccaaagcgagcgagagtgtgctcaccaagatgtggaatgtggtgcagtcc
aacaatggcatcaaggtcctgttgtccctgctgacagtgaagatgcccattacagatgca
gatcagatccgagctctagcctgtaaggctctggtgggtctgtctcgctccagctccgtc
agacagattatcagcaagctgcctttgttcagcagcggacacatccagcagctcatgaag
gagcctttgcttcaggacaaacgcagcgagcacgtcaagttctgtaagtttgcagctgag
ctgatagaaaggatctctgggaaaccgctgatgatcggtactgacgtgtcactggcgtgg
ctgcagagggccagtgtggtcgcccagtccaggatcactttccctgagaaagagctgctg
ttgcttattaggaaccaccttgtggccaaaggccttcatgacacagccaccatacttacc
aaagaggcagaactcccgacggcgtgtctgtctcttacttcactttctacttctgctttc
ccttcggttgctcctcctccacctgccactcctgttgccactctcccccgcacaccacgg
ctggccaatggtgtcggctcaagactcgtgaaccatccttccctttcatccacccccggt
tccagccatccacaaacgcgtccttcaacatcacaatccactgggtcctcttcaactgct
ttcccctctacgtctgtccccctctgtagcaatggatccccactgatcggacgaatcgtt
ttctctcgtgagcgacaagcgggctgccctgtggtgagctccaagaaaccacgtgttctt
aggcagaagtcagaccatggggccttcagccagagtccagccatgaagaagcagtttgac
aggctcttgccctccccccctgcattagacggcattatcacagagtacctgagggagcag
cacgcgcgctgtaaaaaccctgtcgcaacgtgcccgcctttctctctctttacaccccat
cagtgccccgagcccaaacagagacgccaagcaccaattaactttacatcccgacacaca
cggagagtcatatatcctaaatacggaggagtagatggaggctgcttcgacagacatctc
atcttcagcaggttccgtcccatctccgtgttcagggaggctgatgaggatgagagtgga
ttcatgtgttgtgccttctcagctcgcgaacggttcctgatgctcgggacctgcacaggg
cagctcaaactctacaatgtgtttacaggccaggaggaagcaagctacagctgtcacagt
tcagccatcactcacctggagccctcacgggatggctctctgctcttaacgtcagcctct
tggagttaccccctgtctgcactgtggggcatgaaatcagtgttcatcatgaagcattcc
tttctcggtgaccattatgtggagttcagtaaactttcacaagatcgcgtcattggaact
aaggagcatgtagcacgaatctatgacatccagacgggacaggtaacgctgactctcaac
aacccagacctggctaacaactacaagaggaactgtgccaccttcaaccccacggacgac
ctggtgctgaacgacggcgtgctgtgggatgtgcgcacggctcaggccatccacaagttt
gacaagttcaacatgaacatcagcggcgtgttccatcccaacagcctggaggtcatcatt
aacacggaaatctgggatctgcggaccttccacctcctccacactgttcccgctctggac
cagtgcagaatagtcttcaacaacaacggcaccgtcatctatggagcaatgttacaggcc
gatgatgaggacgacatgatggaaatgcagatgaaaagtccgttcggttcgtccttcagg
acctttaatgccacagactacaaaccaatcgccactattgatgtcaaaaggaatatattt
gacctttgcacagacacaaaagactgctacttagctgtgattgagaaccaagactcattt
aacacagacacggtgtgcagattgtatgaagttggccggcagagacttgcagaggaagag
gaggaggacgaggaggaccaggaggatgatgatcaggaggaagatgatgacgatgatgac
gactcggatgatgatatcgacacagacccccttatcgctgagctagagaacggcggagaa
gacgaggatgatgaagaagaggatgatgggaatgaggaattttctccctctgatgaggag
gtggctcgtcttcttgaagtcgatgacgatgacaatgacgacgatgactctgataatgat
gttgatttggatggcgacaatgacagctctgacaactctgaccttgaggatgacatcatg
ttatccctgaacgagtga
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integrated database retrieval system
