Hippoglossus stenolepis (Pacific halibut): 118110573
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Entry
118110573 CDS
T08308
Symbol
nudt21
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5 isoform X1
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118110573 (nudt21)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsp03019
]
118110573 (nudt21)
Messenger RNA biogenesis [BR:
hsp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
118110573 (nudt21)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
118110573
NCBI-ProteinID:
XP_035014355
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Position
1:15602033..15605260
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AA seq
259 aa
AA seq
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MSVVPPSRSAAGWPRGGAVQFGNKYISGPAKPLTLERTINLYPLTNYTFGTKEPLYEKDS
SVAARFQRMREEFDKMGMRRTVEGVLIVHEHRLPHVLLLQLGTTFFKLPGGELSPGEDEV
EGLKRLMTEILGRQDGVKQDWVIDDCIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQ
LQEKALFAVPKNYKLVAAPLFELYDNAPGYGPIISSLPQLLSRFNCGQQGGTEPTALQTD
IHPADISEHNTGDLFKLSN
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtggtgcctcccagtcgctcggccgccggatggccgcgcggtggtgccgttcag
ttcgggaacaagtacatcagcgggcccgcgaaaccgctcaccctggagaggaccatcaac
ctatatcctctcaccaactacacattcggcaccaaggagcctctgtatgagaaggacagt
tcggtggcagcccggttccagaggatgcgggaggagtttgataaaatgggaatgcgaagg
acagtcgagggtgtcctcattgtccatgaacacagactgcctcacgtgttgcttctacag
ctgggcaccaccttctttaaactgcctggtggagagctgagtcctggagaagatgaggtg
gagggtctgaagcgcctgatgactgagatcctcgggcgacaggacggggtgaagcaggac
tgggtgattgacgactgtatcggaaactggtggcgccccaactttgagcctccacagtac
ccctacattccagctcacatcaccaaacccaaggagcataagaaactgttcctggtccag
ctgcaggaaaaagcgctgtttgctgtccccaaaaactataaactggtggcagcaccattg
tttgaactgtatgacaatgctcctggatatggaccaatcatttccagtctaccacagcta
ctgagcaggttcaactgtgggcagcagggtggcacggagcctacagctctacagactgat
atccatcctgctgatatttctgagcacaacactggagacctttttaaattgagtaactaa
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