Hippoglossus stenolepis (Pacific halibut): 118110672
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Entry
118110672 CDS
T08308
Name
(RefSeq) tubulin alpha chain
KO
K07374
tubulin alpha
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04145
Phagosome
hsp04210
Apoptosis
hsp04517
IgSF CAM signaling
hsp04530
Tight junction
hsp04540
Gap junction
hsp04814
Motor proteins
hsp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
118110672
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
118110672
09143 Cell growth and death
04210 Apoptosis
118110672
09144 Cellular community - eukaryotes
04530 Tight junction
118110672
04540 Gap junction
118110672
09142 Cell motility
04814 Motor proteins
118110672
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
118110672
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsp03019
]
118110672
03036 Chromosome and associated proteins [BR:
hsp03036
]
118110672
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hsp04812
]
118110672
04147 Exosome [BR:
hsp04147
]
118110672
Messenger RNA biogenesis [BR:
hsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
118110672
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
118110672
Cytoskeleton proteins [BR:
hsp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
118110672
Exosome [BR:
hsp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118110672
Exosomal proteins of other body fluids (saliva and urine)
118110672
Exosomal proteins of colorectal cancer cells
118110672
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
118110672
NCBI-ProteinID:
XP_035014507
LinkDB
All DBs
Position
6:complement(3748226..3750881)
Genome browser
AA seq
451 aa
AA seq
DB search
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKAIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDIVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVSEITNSCFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDSIEGEGEEEGEEY
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgcatctcgatccacgtcggtcaggccggcgtgcagattggcaatgcctgc
tgggagctttactgcctggaacacgggatccagcccgatggacagatgcccagtgacaaa
gccatcggaggaggagacgactccttcaacaccttcttcagtgagaccggagctggaaaa
cacgtccccagagccgtcttcgtcgacctggagcccactgtcatcgatgaagttcgcact
ggaacctaccgccaactgttccaccctgagcagctgatcactgggaaggaagatgctgcc
aacaactacgcccgcggacactacaccatcggcaaagagatcattgacattgtactggac
aggatccgcaaactggccgaccagtgcactggtcttcagggcttcctggtcttccacagc
ttcggaggtggcaccggctctggcttcacctccctgctgatggagcgtctgtccgtcgac
tacggcaagaagtccaagctggagttctccatctacccagccccccaggtgtccaccgct
gtggtggagccctacaactccatcctgaccacccacaccaccctggagcactccgactgt
gccttcatggtagataacgaagccatctacgatatctgccgcaggaacctggacatcgag
cgtcctacctacaccaacctgaacaggctgatcagtcagatcgtgtcctccatcactgct
tccctccgtttcgatggcgccctcaacgtggatctgaccgagttccagaccaacttggtg
ccatatccccgtatccacttccctctggccacctacgcccccgtcatctctgcagagaag
gcgtaccacgagcagctctccgtgtctgagatcacaaactcctgcttcgagccggccaat
cagatggtgaaatgtgaccctcgccacggtaagtacatggcctgctgcctcctgtaccgt
ggagacgtggtgcccaaagatgtcaacgcagccatcgccaccatcaagaccaaacgctcc
atccagtttgtggactggtgccccactggattcaaggtcggcatcaactaccagccgccc
actgtggttcctggtggagacctggccaaggtccagagggccgtgtgcatgctgagcaac
accaccgccatcgctgaggcctgggctcggctcgaccacaagtttgatctgatgtacgcc
aagagggccttcgttcactggtatgtgggtgagggtatggaggagggagagttctccgag
gccagggaggacatggcagctctggagaaagattacgaggaggtcggagtcgactccatc
gagggtgagggagaagaggaaggagaggaatattaa
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