Hippoglossus stenolepis (Pacific halibut): 118110738
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Entry
118110738 CDS
T08308
Symbol
hnrnpa1b
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1b isoform X1
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118110738 (hnrnpa1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsp03019
]
118110738 (hnrnpa1b)
03041 Spliceosome [BR:
hsp03041
]
118110738 (hnrnpa1b)
Messenger RNA biogenesis [BR:
hsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
118110738 (hnrnpa1b)
mRNA cycle factors
Common to processing body (P body) and stress granule
118110738 (hnrnpa1b)
Spliceosome [BR:
hsp03041
]
Common components
Common spliceosomal components
hnRNP proteins
118110738 (hnrnpa1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
RBD_AKAP-17A
Motif
Other DBs
NCBI-GeneID:
118110738
NCBI-ProteinID:
XP_035014640
LinkDB
All DBs
Position
6:complement(12375084..12379303)
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AA seq
342 aa
AA seq
DB search
MSMKDVPREPEQLRKLFIGGLSFETTDESLRAHFEKWGSLTDCVVMRDPNTKRSRGFGFV
TYSSVQEVDDAMNDRPHKVDGRVVEPKRAVSREDSNRPGAHVTVKKIFVGGIKEDTEECH
LRDYFQQFGKIEVIDIMTDRATGKKRGFAFVTFDDHDSVDRIVIQKYHTVNSHNCEVRKA
LTKQEMQTAGMGRSSGGRPYDYDRGFQQGGRGGGRYGDGPYNCNGGDGGYGGGPSGPGGY
NNGGNRGYNQGYNQGGGGGGGGYGGNGYESNGYGNCGGGGGGGGGGGGGGNYNNMGHYDP
QASNFGPMKNNFGGGGGGGSSGRNFGGYGGGSNSGYGRPGRF
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgaaagatgtcccacgtgagccggagcagctccgcaagctgtttatcggaggt
ttgagcttcgagaccacagacgagagtctgcgagctcatttcgagaaatgggggagcctc
acagactgtgtggtcatgagggaccccaacaccaagcggtccaggggctttggatttgtc
acatactcatcggtgcaagaagttgatgacgccatgaatgatcgcccccataaggttgat
gggcgtgtggtggagccgaaacgagctgtttctagagaggattcaaaccgaccaggtgct
catgtaacggtaaagaaaatctttgttggaggcatcaaggaagatacggaggagtgtcac
ctgcgtgactacttccagcagtttggcaagatcgaggtcattgacatcatgactgatcgt
gctacgggaaaaaagaggggctttgcctttgtcacgtttgatgaccacgattcagtcgac
aggattgtcatccagaagtatcacacggtgaacagccacaactgcgaagtcaggaaggcc
cttacaaagcaagagatgcagacagcaggcatgggtcgcagcagtggtggaaggccatac
gattatgacaggggcttccaacagggtggtaggggcgggggtagatacggagatggtcct
tacaattgcaatggaggcgacggtggctatggaggtggccctagcggtcctggtggatat
aacaatggcggcaaccgtggatacaatcaaggctacaaccagggcggaggtggtggcggt
ggaggctatggaggaaacggatatgagagcaatggctatggaaactgtggtggtggtgga
ggaggaggcggcggtggtggcggcggcggcaactacaacaacatgggccactacgacccc
caggcgtccaacttcggcccaatgaagaacaactttggtggtggtggcggtggcggcagc
agtggtaggaacttcggtggctacggaggtggctccaacagtggatacggccgtccgggg
cgattttaa
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