Hippoglossus stenolepis (Pacific halibut): 118110795
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Entry
118110795 CDS
T08308
Symbol
ube4b
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04120
Ubiquitin mediated proteolysis
hsp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118110795 (ube4b)
04120 Ubiquitin mediated proteolysis
118110795 (ube4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsp04121
]
118110795 (ube4b)
Enzymes [BR:
hsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118110795 (ube4b)
Ubiquitin system [BR:
hsp04121
]
Ubiquitin ligases (E3)
U-box type E3
118110795 (ube4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
118110795
NCBI-ProteinID:
XP_035014755
LinkDB
All DBs
Position
6:15215195..15232953
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AA seq
1382 aa
AA seq
DB search
MEELSADEIRRRRLVRLAGGQTSQPGTPLSTPLTSPQRETPPGPLHGPSGVAPQPLPPAA
SQSLGLNVHSGTPATSPMGTSGVAYGSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDID
TASCEKSMSQVDVDSGIENMEVEDSDRREKRNLTDKETSANSDVSEEQALQLICKILRVS
WKEQDRDVIFLPSLATEFHQNPKDAYSDFKDLIGQILMEVLMMSTQSRIHNPFASLTATS
QPIAAAKSPDHRLTLVQPSSLGGSPMGPSAGSFGASSLSSLYGCGSPHPMALDVAKRTSP
SLPTPTTPSTPSTPSTPSTPQFIVPHIPPVTATPRHSLNPPSAPLPISQRYRPYSVTSSG
GAPSPSSWGHRGVGFFEPSPSPAGPSVPPNTPVPVPPLSPQSLSLSSPGAHNLPSSTPPT
TVPPSPRSNARQTAFGSRIPPSSPLSFLFFALSDMSQDSSDEESEEEEDFARVQFGSSLG
ACGGGMSCDSASDRFTIEACKETEMLNYLIERFDSVGMEERKAPKICSQPNVSQLLSNIR
SQCISHVALVLQGTLTQPRSPLQPSLLVPYMLCRNLPYGFIQELARITHPEEGVFRQIFI
PILHGLALAVKECSFDSDNFKFPLMALAELCEIKFGKTHPVCSLVTSLPLWCPKPLSPGS
GREIQRLSYLGASFSLSVFAEDDTKVGDKYFSGPAITIENTRVVSQSLQHYLESARGDLF
KVLHNILLNGETRELALNYMAALVNYNVKKAQMQTDDKLVSTDGFMLNFLWVLQQLSMKI
KLETVDPYYIFHPRCRLVVSSEETRLKATMEELKSWLTELHDDPNKFSEPKFPTECFFLT
LHAHHLSILPGCRRYIRRLRAIRELNRTVEELKNSENQWKDSPLASRHREMLKRCKTQLK
KLVRAKACADVGLLDENLLRRCLQFYSTVIQLILRMVDPAYPNINLPLNPEIPKSFAALP
EFYIEDVAEFLLFVVQYSPQVLYEPCVQDIVTFLVVFICSQNYIRNPYLIAKLVEVLFVT
NPAVQPRTQRFSEMMENHPLSIKQLVPALMKFYTDVEHTGATSEFYDKFTIRYHISTIFK
SLWQNIAHHGTFMEEFNSGKQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQW
EQLPREQQQSRQSQLTQDERVSRSYLALATETVEMFHILTKQVQKPFLRPELGPRLAAML
NFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSRE
LFEEVISKMRKAGIKSSIAIEKFKLLSDKVEEIVARNSQSEMDYSDAPDEFKDPLMDTLM
TDPVILPSGNIMDRSIILRHLLNSPTDPFNRQPLTESMLESVPELKERIHTWMREKQGGR
PF
NT seq
4149 nt
NT seq
+upstream
nt +downstream
nt
atggaggaactgagcgcagatgagattcgcagaaggcggctggtgcgactggcaggcgga
cagacgtcacagcccggcacccctctcagcacacccctgacatccccacagagagagact
ccacctggacccctccatggaccctcaggtgtcgcaccccagcccctgccaccagctgcc
tcccaatcattggggctgaatgtccacagtggtacccctgccacatcccctatgggcacc
tctggggtggcgtatggtagtcagagcagcgagggcgtcagctccctctccagctcccct
tccaacagccttgagactcagtcccagagtttgtcccgatcgcagagcatggacatcgac
actgcctcctgtgaaaagagcatgtcccaggtggatgtggactcagggatagagaacatg
gaggtggaggacagcgatcgcagggagaagaggaacttgacagataaggaaacctctgca
aactctgatgtctccgaagaacaggctctgcagctcatttgtaagatcctccgcgtatcg
tggaaggaacaggatagagatgtcatctttctcccttcactggctacagagttccaccag
aaccctaaagatgcatactctgacttcaaagacctcatcggccagatcctgatggaagtc
ttaatgatgtccacccagtcacgtatccacaacccctttgcgagcttgaccgccacctct
cagccaattgcagcagccaaatctcctgaccaccgactgacgctggtgcagccctccagc
ctcggtggcagtcccatgggccccagtgcaggatcctttggtgccagctctctgtccagt
ctgtatgggtgtggtagtcctcacccaatggctttggatgtagccaagaggacttctccg
tctcttcccacccctactacaccctctacaccttctacaccctctaccccctctacccca
caattcattgttccccacattccacctgttactgctactccgagacactccctcaaccct
ccatctgcccccctgcctatctcccaacgctatcggccctactctgtcacctcttccggg
ggggctccttccccatccagctggggacacagaggagttggtttctttgaaccctctccg
agccccgctgggccctctgttcctcccaacaccccagttcctgtgccaccactcagcccc
cagtccctctccctgagctcccctggggctcacaacctgccctcctccacaccccctacc
acggtgcccccttctcccagatcgaacgctcgccaaactgcctttggttccaggatccca
ccatctagccccttgtcgttcctgttctttgccctgtctgacatgtctcaggacagcagt
gatgaagagtctgaggaggaggaggattttgcgcgggttcagtttgggtccagtcttggt
gcatgtggaggggggatgtcctgcgactcagccagcgaccgcttcaccattgaagcatgc
aaagagacggagatgctgaactacctcattgagcgttttgacagtgttggcatggaggag
aggaaagctcccaagatctgcagccaaccaaatgtcagccagcttctcagtaacattcgc
tctcagtgtatttctcacgttgccctggtcctgcaaggcaccttgacccagcctcgaagc
cctctccagccgtctctgctggtaccttatatgctgtgtcggaaccttccttacggtttt
attcaggagctggcacgcattacccacccggaggaaggagtgttcagacagatcttcatt
cctatcctccatgggctggctcttgcagttaaagaatgttcttttgacagtgacaacttt
aaattcccgctcatggcattagctgaactttgtgaaattaagtttggaaagactcaccca
gtgtgcagtttggtaacgtcgctgcctctatggtgtcccaaacctctgagccctggttct
ggccgagagatccagagactgtcttacctgggagcctccttcagcctctctgtgttcgct
gaggatgataccaaagtaggagacaaatatttctcgggcccagccatcaccatagagaac
acacgagttgtcagccagtcattgcagcactacctggagtcagcaaggggtgacctgttc
aaagttcttcataacatcctactaaatggagagacgcgcgagttagctcttaattacatg
gcagctttagtcaattacaatgtgaagaaagctcagatgcagaccgatgacaagctggtg
tctacagacggcttcatgctgaacttcttatgggtgctgcaacagctgagcatgaagatc
aagctggagacggtggacccttattacattttccacccacgctgtcgccttgttgtcagc
tcagaggaaacgcgtctaaaggccactatggaggagctgaaaagctggctgactgaattg
cacgacgaccccaacaagttctcagaacccaagttccccacagagtgtttcttcttgaca
ctgcacgcccaccatttgtctatcctgcctggctgcaggcgctacatccgcaggttgcga
gctatccgtgaactaaacaggactgtagaggagctgaagaacagtgaaaaccaatggaaa
gattctcccctggccagtcgacacagagagatgctcaagcgctgtaaaacccagctcaaa
aaactggtgcgagccaaagcttgtgctgacgtgggccttctggatgagaacctgctccgc
agatgtctgcagttctacagcacagttattcagctcattctccgcatggtggaccctgcc
tatccaaacattaacctgccactgaaccctgagattcccaaaagctttgctgctctcccc
gagttctacattgaagatgtggctgagtttctgctttttgttgtgcagtattctccccag
gttttatatgagccatgtgtccaggacattgtcaccttcttggtggtgttcatctgcagc
cagaactacatcaggaacccctaccttatcgccaagttggtggaggtgctgttcgtcacc
aaccctgctgtacagccccgtactcagcgattttccgaaatgatggagaaccacccattg
tccatcaaacagctggtccctgccctcatgaagttctacacagatgttgagcataccggc
gccaccagcgagttctatgataagttcactatacggtaccatatcagcacgatcttcaag
agtctctggcagaacattgcccaccatggcactttcatggaggagttcaactctggaaag
cagtttgtgcgctacatcaacatgctgataaacgacaccaccttcttgttagacgagagc
cttgagtccctgaagcgtatccacgaagttcaagaagagatgaaaaataaggagcagtgg
gagcagctaccgagggagcagcagcagagccgccagtcccagctgactcaggatgagcgg
gtgtctcgctcctatctggccttggccacagagacggttgaaatgttccacatcctcacc
aagcaggtccagaagcctttcctcaggcctgagcttgggcctcgtttagctgccatgctg
aactttaacctccagcaactctgtgggccaaagtgtcgggacctgaaggtggagaaccct
gagaaatacggctttgagcccaagaagctcttagaccagctgaccgatatctacctgcag
ctggactgtgcccgttttgctaaagcaattgcagacgaccagcggtcgtacagccgtgag
ctctttgaagaggtgatctcaaagatgaggaaggctggaatcaagtcatccatcgccatt
gaaaaattcaagctgctgtctgataaggtggaggaaatagtcgccaggaactcccagtct
gagatggactacagtgatgcacctgacgagttcaaagaccccctgatggacacactgatg
actgaccctgtgattctaccttcggggaacatcatggatcgatccatcatcctacgccac
ctgctcaactccccaaccgatcccttcaacaggcagccgctcacagagagcatgttggag
tcagtcccagagctgaaggagaggatccacacctggatgagagagaaacaaggtggacgg
cccttttga
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integrated database retrieval system
