Hippoglossus stenolepis (Pacific halibut): 118110857
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Entry
118110857 CDS
T08308
Symbol
otud5a
Name
(RefSeq) OTU domain-containing protein 5-A isoform X1
KO
K12655
OTU domain-containing protein 5 [EC:
3.4.19.12
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
118110857 (otud5a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hsp01002
]
118110857 (otud5a)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsp04121
]
118110857 (otud5a)
Enzymes [BR:
hsp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118110857 (otud5a)
Peptidases and inhibitors [BR:
hsp01002
]
Cysteine peptidases
Family C85
118110857 (otud5a)
Ubiquitin system [BR:
hsp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
118110857 (otud5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OTU
Peptidase_C65
RPAP1_N
Motif
Other DBs
NCBI-GeneID:
118110857
NCBI-ProteinID:
XP_035014872
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All DBs
Position
6:1856384..1870478
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AA seq
586 aa
AA seq
DB search
MTILPKKKPSSGVGVSDHADDSDRRSGSDQHQHPHPHAGRTGARPRASPPPWSYQPAPPS
ARDDRRSIEASSRPQQASPPPVGSVSPVGPGDGRDSSGGMVAGSRGELVVSGGVAGCGGG
IGSCCSGPGLSKRRRQAGTCSGGVVAALAGGGQPGVAGPGGVGSSQDTEEGAGNNSEDEY
ENAARLQSMDPATVEQQEHWFEKGLREKKGFVIKKMKEDGACLFRAVADQVYGDQDMHEV
VRKHCMDYLMKNADYFSSYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQYS
TEPINTFHGIHQNNDEPIRVSYHRNIHYNSVVNPNKATIGVGLGLPAFKPGYADQSLMKS
AIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQVARESYLQWLQDQEKQARQPRKASAT
CSSATAAASSGLDDWSARSPRQRDSDPSHSDLTSSSSTNNKPPSPAGAALILSKPPSPCA
PGNTHTRAHHVGHVHDQSETSRFYCPRYLSVLITLYSAGPSNQSRHHLEYRAIMQEMSPT
AFGLTDWEDDEILASVLAVSQQEYLDSMKHQSAAMHREREPSPDSS
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgacgattctccccaagaagaagcccagctccggggtcggggtatcggaccacgccgat
gacagtgaccgtcgcagcggctccgaccagcaccagcacccgcatccgcacgcggggcgg
accggagctcggccgagggcttcgcctccgccgtggtcctaccagcccgctccgccctcc
gccagggacgacaggcggagcatcgaagctagctcccgtccgcagcaggcctctccgccg
cccgtcggctccgtgtcccccgtggggccgggagacggccgggacagcagcggtgggatg
gtggccgggtcccgtggggagctcgtcgtatcgggcggcgtcgccggatgcggcggaggc
atcggcagctgctgctccgggcccggactgagcaagagacggcggcaggcaggcacctgc
tccggcggggtggtggcggctctggccggcgggggccagcccggtgtagctggaccggga
ggagtggggtccagccaggacacggaggaaggagccgggaacaacagcgaagacgagtac
gagaacgccgcccggctgcagtctatggacccggctaccgtggagcagcaggagcactgg
tttgaaaaaggtctgagggagaagaaaggctttgtcatcaagaagatgaaggaggacgga
gcgtgtctgttcagagccgtggccgatcaggtgtatggagatcaggacatgcatgaagtg
gtcaggaaacactgtatggattacctgatgaagaacgcagactatttctcgagctacgtg
acagaggatttcaccacatacattaacaggaagaggaaaaacaactgccacggcaaccac
attgagatgcaggccatggccgagatgtataacagaccggtggaggtgtatcagtacagc
acagagccaatcaacacgttccacggcatccaccagaacaacgacgagcccatcagagtg
agctaccaccgcaatattcactacaactctgtggtgaatcccaacaaggccacaattggg
gtcggactgggactgcccgccttcaaaccagggtacgcagaccagtctctgatgaaatcg
gccatcaaaacgtcggaggagtcatggattgagcagcagatgttggaggacaagaagaga
gcgacggactgggaggctacaaacgaggccatcgaggagcaggtggcccgggagtcgtac
ctgcagtggctgcaggaccaggaaaaacaagcccgacagcctcgtaaggccagcgccacc
tgcagctcggccacggcagcagcttccagcggactggacgactggagcgcccggtcgccg
cggcaacgggactctgacccctcccactccgacctcacgtccagctcgtcgaccaacaac
aagccgccctctcccgctggagccgcactcatcctgagcaaacccccgtcaccctgcgct
ccaggtaacacacacacacgtgcacatcatgtgggtcatgtacacgaccaatcggaaaca
tccaggttctactgtcctaggtacttatctgtactaataactctttactctgcaggtccc
agtaatcagagtcgtcatcatctggagtacagagccataatgcaggagatgtcgcctaca
gcgtttggtttgacggactgggaggatgatgagattctggcgtcggtgctggccgtctct
cagcaggagtacctggacagcatgaaacaccagagcgccgccatgcatcgagagagggag
ccgtcacctgacagcagctga
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