Hippoglossus stenolepis (Pacific halibut): 118110867
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Entry
118110867 CDS
T08308
Symbol
aaas
Name
(RefSeq) aladin
KO
K14320
aladin
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118110867 (aaas)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsp03019
]
118110867 (aaas)
Messenger RNA biogenesis [BR:
hsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118110867 (aaas)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
ANAPC4_WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
eIF2A
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
PD40
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_WDR75_1st
EIF3I
Motif
Other DBs
NCBI-GeneID:
118110867
NCBI-ProteinID:
XP_035014890
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Position
6:7000864..7006139
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AA seq
519 aa
AA seq
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MCSLSLFPPPLALGQSTLCESNNELLPGDNTEDRAKQETSPLSLYFPRESLKLHSRTESS
SKAAFLDHSETLWMRSAAAWRDGGFTGLLTEITNSNTEVPKWLSVSSGCTLALLQRVSSF
HGSLFPHLTLSSENMIAEFSQVLNWSDCVVRAFAWHPHTDKFAVALLDDSIKIYNPKSAT
TPTLKHRLQRSVAAVQWKPLCASALAVACQNCLLVWHVDPCSLSTRPSSGCAQVLSHPGH
SPVTSIAWSPNGSLLVSASPMDTAVMVWDVAAESCVPLQRVGGGGVTFLSWSPDGSHVLT
STPSALFRVWETRMWTCERWPCVKGRCQSGCWSPDGSRLLFTVQGEMVIYALTFTDAPGI
STGTSKGSQAAAVVADLSETTFNTPDGDIILGGEIQSIAWDPRGERLAVILQGDPQAADR
PAIIAVFKTRTNPIFELLPCGFVQGEADAEPRLMQFHPNFQHGALLTVCWSNGRITHVPF
YFLSTAVPHFGLSGSPLLPRPQERPSALANQSLFTELIS
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgtgctctctgtcgctgttcccccctccgctggccctcggacagagcaccctgtgcgag
tccaacaacgagctgctgcccggggacaacaccgaggaccgagccaagcaggagaccagt
ccactgagtctctacttcccccgagagtctctgaagctccacagccgaacagagagcagc
agcaaggcggcgtttctggaccattcagagaccctgtggatgaggagtgctgcagcgtgg
cgggatggtggtttcacaggactactgaccgaaattaccaattcaaatacagaggtgcca
aaatggctgtcagtgagttctggttgcaccctggcattgctccagagggtctcttcgttt
cacggctccttgtttcctcatcttacattaagcagtgaaaacatgatagctgagttttca
caagtactgaactggtctgactgtgtggtgcgagcctttgcgtggcatcctcacacagat
aaatttgctgtcgccctcctggacgactccattaaaatctacaaccctaaaagcgccacc
actcccacactaaagcaccgtctccagaggagcgtggcagcagtgcagtggaagccgttg
tgtgcgtctgctttggctgtcgcttgtcagaactgtttactggtctggcacgtggacccc
tgctcactgtcaaccaggccttcatctggttgtgctcaagttctgtctcatcctggtcac
tccccagtcacttccatcgcctggtctccaaacggatctcttctggtgtcagcctcgccc
atggacactgcagtaatggtttgggacgtcgctgctgaaagctgtgtgccactgcagcgg
gtcggaggaggcggggtcacctttctgtcctggtcccctgacggcagccatgtcctgact
tctacaccctctgccctcttcagggtttgggagaccaggatgtggacctgtgagcgttgg
ccatgtgtgaaaggacgctgccagtctggctgttggagtccggatgggagtcggcttctc
ttcactgtgcagggcgagatggtcatctacgctctaaccttcactgacgcaccaggcatc
tctacaggcacatccaaaggatcacaggcagcagctgtggtggctgacctatcggagaca
acctttaacacaccagatggagacatcattcttggtggagagatccagtctatagcctgg
gatccaagaggagagagactcgcagtgattcttcaaggagatccacaggcagcagaccga
cctgcgatcatagccgtgttcaagacaagaaccaaccccatctttgagcttttgccatgt
ggttttgttcaaggggaagctgacgcagagcccagactgatgcagttccacccaaatttc
cagcacggagccctgctcactgtgtgttggtccaatggaagaattacccatgtgcctttc
tacttcctgagtactgctgtcccccattttggcctgagtggcagtccgttgttgcctcgc
ccgcaggaaaggccgagtgccttggccaatcagtcgctcttcacagagttaatctcttga
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