Hippoglossus stenolepis (Pacific halibut): 118110933
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Entry
118110933 CDS
T08308
Symbol
prdm2a
Name
(RefSeq) PR domain zinc finger protein 2
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp00310
Lysine degradation
hsp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
118110933 (prdm2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsp03000
]
118110933 (prdm2a)
03036 Chromosome and associated proteins [BR:
hsp03036
]
118110933 (prdm2a)
Enzymes [BR:
hsp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
118110933 (prdm2a)
Transcription factors [BR:
hsp03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
118110933 (prdm2a)
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
118110933 (prdm2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-C2HE
zf-C2H2_jaz
zf-C2H2_6
zf-C2H2_ZNF462_1st
zf-C2H2_11
Zn_Ribbon_YjdM
Upf2
zf-C2H2_8
YscO-like
DUF5035
Motif
Other DBs
NCBI-GeneID:
118110933
NCBI-ProteinID:
XP_035014993
LinkDB
All DBs
Position
6:16381306..16390350
Genome browser
AA seq
1330 aa
AA seq
DB search
MEPDVIKSLHPDLHKHPHQDTERVWEAFPCQHCERHFTSKQGLERHMHVHALANSEEHVH
ISNNSNMSSGTNQGELQPENMKPLDSVMQHYTSSPASSYTSLLTAGEHIAQPDEQGVHPQ
LAGEEKTQLPVEENLERIFSETAEQITQLGENIASATVIQNVGQHTQYMLDVSSNISENL
SFYIDGKIVSTSTVSSCETSEVHSGSSALVGLDALILDPAQISQVLNADSVTGTEIPGQP
LTKRRTATPPLLPQIKTELESEVVVSSSSSSLVSSLIENLLPLNTESTVVQKERTVFLSP
KLKQLLEKQDGLNPTLALITEGQKPCSPVSLSVLPIGTGRFKRRTGSPTSSQQQNSTSIE
ETPVSDTGNIVDERTGQMETQQISPVHLTASEKDDATPPVEEPAVKPVSTESWPPMTGGN
SCNQQPLDLSNTVRRNEDLALADAVLDLSLQRRLGESGLTINLVSQAVLTEETLNSCMMA
KPFMNIGEQNVSLGNLENSLLTDFAIVTGSDIMTSVEPIAEGLVYGLALPPSSLTPSPAL
QPASPCTIAFASPSSHRMLTSTPSLITVLASSPHITNPSNQPIQMLAPNISPDPLVICTE
NALNPSECDLTAAFAGTNPANLVTLSQPLDPTLNLQGHLFLTDQISLNPSLVESTPVSEV
PFTPTVTLSDSLLNSYNITSNTVLIECTISLETPGSVVPAAITLQESPSEAPVPTQMVVN
HIEQQQIVSVPDSPSVDPTILVSSIAESVTLATTTSVVSDCPPVAESSPKPEPVVKAEPP
TTKEEEAADDTLSSPDTPSQTSPLTEKAEEDKSSYNIPGDAQQQTFTKNFICNVCDKLFH
SMKELGQHVGDHADEWPYKCEFCVLLFGKPSALLDHRSSLHGVGKTYVCSACTKEFVYLC
NLKQHQEELHPGQQCTYTEEEKGKLRPQNYNNSTKVSVEPSVPHISEEAKTMVKKEESEV
DVAAEELFTTIKIMASDGGKFKGPDVRFGINQHYPSFKPPPFPYHNRSPAGLVASATNFT
THNIPQTFTTAIRCTKCGKSFDNMPELHKHILACANASDKRRYTPKKNPIPLRHFAKTQN
GVLSTTNSTNGLNASNRASQSNRSKSHQDSPIKMKFKLLNKRKKKFVQRVMPQRNKSVSS
SNKATSAQVDVQVFVCPHCNREFSMRRSRTKHMAVCPKKPKEVKKRKEGGISVTKENNGR
LHRGISRGAEKQQASPQHKTRFQTSSLAKRPAILPVQTVFSNKRSKIIIKESMQPKQESP
TLNELPIVRTFNPSMRQYSRVQHGVKGIPIKITIVKPQQTAPQKDELLPAQSREEGTGAV
TSSSEQSMKT
NT seq
3993 nt
NT seq
+upstream
nt +downstream
nt
atggaaccagacgtgatcaagtctctacacccagatcttcacaaacatccccatcaggat
actgagagagtgtgggaggcttttccctgtcagcactgtgagagacattttaccagcaaa
caaggcttggagcgacacatgcacgtccatgctttggctaacagcgaggaacatgtacat
ataagcaataacagcaacatgtcttcaggtacaaatcaaggggagttgcagcctgagaat
atgaagcctttggattctgtcatgcaacattatacttcatcccccgctagctcttatact
tccttgttgacagccggagaacacatcgctcagccggacgaacagggggtacacccgcaa
cttgctggtgaagagaaaacccagctacctgtggaggaaaatcttgagaggattttcagt
gaaacggctgaacagataacacagcttggtgaaaatatagcatctgcaactgttattcag
aatgtagggcaacacacacaatacatgctagatgtctctagcaatatttcagagaatctc
agcttctacattgatggaaagattgtgtcaacaagtacagtaagtagctgtgaaacatct
gaggttcattcaggttcctcggctttagttggactggatgccctgattctggaccctgcc
caaatcagccaggttctgaatgcagattcagtcacaggcacagagatacctggtcaacca
ctgactaagagaagaactgcaacaccacctcttttaccacaaattaaaacggaactggag
tctgaggtggtggtgtcctcttcctcatcatcgcttgtgtcatctttgattgagaatctg
cttcccctgaatacagagtccacagttgtgcagaaagaaagaacggtgtttctgtcccca
aagctgaagcagcttctggagaagcaggatggccttaacccgacactcgccctgatcaca
gagggtcagaagccttgttcgcctgtctctctctccgtccttcccattggaacaggaagg
tttaaaagacggaccggatctccaacaagctctcaacagcaaaactcaacgtccatcgag
gaaacgccagtgtcagacaccggaaatattgttgatgaaagaacaggacagatggagacc
cagcagatctcccctgtgcatctaacagctagtgagaaagatgatgctacgccacctgtg
gaggagccagcagtgaaacccgtctcaacggagagctggccccccatgactggtggcaat
tcctgtaaccagcaaccactggatctctctaatacagtcagaagaaatgaagatttagcg
ttagctgatgctgtgctggatttaagtttgcagagaaggctaggcgaatctggactgaca
ataaatttagtctcacaggcagttttgacagaagaaacattaaattcatgcatgatggcg
aaaccctttatgaatatcggagagcaaaatgtaagcctgggaaatctagaaaattcttta
cttacagactttgccatagtcacagggtcagatataatgacctcggttgaacctattgca
gaaggtcttgtttatggacttgccctaccccccagttctctaaccccatcacccgccttg
cagccagcctcaccgtgcactattgcatttgcctccccatcctcacacagaatgctcact
tctactccttcattaatcacagttttggcttcatcaccacatattacaaacccttcaaac
caaccaatccagatgttggctccaaacatatctcctgaccctttggtcatctgcacagaa
aatgcactgaatccttcagagtgcgatttaaccgctgcatttgccggaacaaatcctgca
aaccttgtcactctctcccaacccctggaccccactttaaatctacagggccacttgttt
ctcactgatcagatttctctcaatccgtctctagttgaatccactcctgtgtcggaggta
ccattcacacctactgtaactttaagtgactccctcctcaactcttataacataaccagt
aacacagtgttgatagagtgcacaatatctcttgaaaccccagggagtgtggtccctgct
gcaattaccttacaagaaagcccttctgaggctccagtacctacacagatggtcgttaat
cacatcgaacagcaacagattgtatcagtgcccgactctccatctgtggaccccactatc
cttgtgtcctccatcgccgaatcagtaactctggccaccaccacctcagtggtatctgat
tgtcctcctgtggctgaatcgagtcccaaaccggaacctgttgttaaggcagagccgccc
accacaaaagaagaggaagctgctgacgatactctttcctcacctgatacaccatcacaa
acttcacctttaactgagaaagcggaagaggacaaatcctcatataacataccaggtgat
gcacaacagcagactttcaccaagaatttcatctgcaatgtgtgtgataagcttttccat
tcaatgaaagaactaggccaacatgttggtgaccatgctgatgaatggccctacaaatgt
gaattctgcgtgctgctctttggaaagccctccgctttgctcgaccatcgatcaagcctc
cacggtgttggcaagacttacgtttgcagcgcgtgtacaaaagaatttgtctacctctgc
aatctgaaacagcatcaggaggaattgcatcctggccagcagtgcacatacacagaagag
gaaaagggaaaactaagacctcagaactacaacaactcgacaaaggtcagtgtggagcct
tcagtgccccacatttcagaggaagccaagacaatggtgaaaaaggaggaaagtgaagta
gatgtggctgctgaagagttgtttacaaccataaaaataatggcctccgatggagggaaa
ttcaaagggcctgatgttcggtttggcattaaccaacactatcccagctttaagcctcct
ccatttccttaccacaataggtcgcctgccggcttggttgcttcagccaccaacttcacc
acccacaacatcccacagacctttactacagctattcgctgtaccaagtgtggaaaaagc
ttcgataacatgccagagctacacaagcatattctcgcgtgtgcaaatgccagtgataaa
aggcgatacacacccaaaaagaatcccatccctttaagacactttgcaaaaactcagaat
ggagtactgtcgactactaattctactaacgggcttaatgcttcgaacagggccagccag
tcaaacaggtccaaatctcaccaagactccccaataaagatgaaattcaaattactgaac
aaaaggaagaaaaagtttgtccaaagggtaatgccacagaggaacaagtccgtttcttct
tcaaataaagcaacgtctgcacaggtggatgtgcaggtatttgtctgcccacactgtaac
agggagttctcaatgcgtcgcagcagaaccaaacacatggccgtgtgtcccaagaaacct
aaagaggtgaagaaaagaaaagaaggtggaatctctgtgacaaaggagaacaacggccgc
ctgcaccgagggatttctcgtggcgcagagaaacaacaagcctcacctcagcataaaact
agattccagacttctagcctcgccaagaggccggccatccttccagtgcagactgtcttt
tcaaacaaaagaagtaaaataatcataaaggagagcatgcagcccaaacaagagagccca
actctcaatgaacttcctattgttcgcactttcaatccctcgatgcgccagtacagccga
gtgcagcatggcgtcaaaggaatccctattaaaatcaccatagtgaaaccgcagcagact
gcaccacagaaggatgagctgcttcccgcccagagccgagaggaaggcactggagccgtt
accagcagctctgagcagagcatgaagacttga
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