Hippoglossus stenolepis (Pacific halibut): 118110968
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Entry
118110968 CDS
T08308
Symbol
kars1
Name
(RefSeq) lysine--tRNA ligase isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
118110968 (kars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hsp01007
]
118110968 (kars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsp03016
]
118110968 (kars1)
Enzymes [BR:
hsp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
118110968 (kars1)
Amino acid related enzymes [BR:
hsp01007
]
Aminoacyl-tRNA synthetase
Class II (A)
118110968 (kars1)
Transfer RNA biogenesis [BR:
hsp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
118110968 (kars1)
Prokaryotic type
Other AARSs
118110968 (kars1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
DUF374
RRP14
Motif
Other DBs
NCBI-GeneID:
118110968
NCBI-ProteinID:
XP_035015056
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All DBs
Position
1:14236981..14247066
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AA seq
610 aa
AA seq
DB search
MLCLVRAARQQLCRACGVRGQWLKCASPRTAAVPAQFYGNQSRGDKSELKRRMKADKKAA
EKDAKVKEQVEQKKESNDQAVQDVCGLDEETLDPNQYFKIRSQAIQELKGTAEDPYPHKY
HVDLSLTDFIEKYNHLQPGDQLTDVFLNVTGRVHAKRASGAKLIFYDLRGEGVKLQVMAN
SRNYKSEEAFVAINNKLRRGDIIGVRGNPGKTKKGELSIIPVELTLLSPCLHMLPHLHFG
LKDKETRFRQRYLDLILNDYVRQKFITRSKIITYLRNFLDQLGFLEIETPMMNIIPGGAV
ARPFVTYHNDLDMNLFMRIAPELYHKMLVVGGMDRVYEIGRQFRNEGIDLTHNPEFTTCE
FYMAYADYNDLMEITEKLLSGMVKHITGGYKVTYHPDGPEGQACEIDFTPPFRRVSMTHD
LEKIMGVKFPPADSYDSDETRKFFDVLCAQKGVECPPPRTTARLLDKLVGDYLEVTCINP
TFICDHPQIMSPLAKWHRSEKGLTERFELFVMKKEVCNAYTELNDPIRQRELFEQQAMAK
AEGDDEAMFIDETFCTALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFPAMKPDDNK
SSAPVEGTSV
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgtctggtcagggcagccaggcagcagctgtgccgagcctgtggtgtcagggga
cagtggttaaaatgtgcgtccccacgtacagctgcagtcccggctcaattttacgggaac
caatcgagaggtgacaaaagtgagctgaagagacgaatgaaagctgacaagaaggcagcc
gagaaagatgccaaggtcaaagagcaggtggagcaaaagaaagaatccaatgaccaggca
gtgcaagatgtctgtgggctggatgaggagactctcgacccaaatcaatacttcaagatc
cgctcccaggccatccaggaactgaagggcacagctgaggacccgtacccacacaagtac
catgtagacctgtcactcacagatttcattgagaaatacaatcatctacagccaggagac
cagctgacagatgtttttctcaatgtgacaggtcgcgtccatgccaagagggcatctggg
gccaagctgatcttctatgacctgcgaggcgaaggcgtcaagctgcaggttatggcaaac
tcaagaaactataagtctgaggaagcctttgtggccatcaacaacaaactacgccgtggt
gacatcatcggcgtccgtggtaacccggggaagactaagaaaggggagttgagcatcatt
cccgtcgagctgaccctgctgtctccttgtttgcacatgctgccgcacctccacttcggc
ctcaaagacaaggaaacacgattccgacagcgctacttggatctgatcctcaatgactac
gtgaggcagaagtttataactcgctccaagatcatcacatacctgcgtaacttcctggat
cagctcggatttttagagattgagacaccaatgatgaacattattcctggtggagcagtg
gctcgtccatttgttacttaccacaacgatctggatatgaacctgttcatgaggattgct
cctgagctctaccacaagatgcttgtggttggtggaatggacagagtgtatgagattggt
cgtcagttcaggaatgaaggcatcgacctgactcataatccagagttcactacctgtgaa
ttctacatggcttatgcagattacaatgacttgatggaaatcacagagaaacttctctcg
ggaatggtgaagcacatcactggaggatacaaggtgacgtatcaccctgatggtccagag
ggtcaggcctgtgagattgacttcactcccccattcagaagagtgagcatgacccacgac
ctggagaagatcatgggagtcaaattccctccagctgacagctacgacagtgatgagaca
cgtaaattctttgacgtcctctgcgcacagaaaggagtcgaatgtcctccacccagaaca
actgcccgcctccttgacaagttggttggagattaccttgaggtcacgtgcatcaatccc
acattcatctgcgaccaccctcaaatcatgagtcccttagcaaaatggcacagatcggag
aaaggcctgacggagcgttttgagctctttgtgatgaagaaggaagtctgcaacgcctac
actgagttgaatgatccaattaggcagagggagctgtttgagcagcaagccatggccaaa
gctgagggggatgatgaagccatgttcattgatgagaccttctgcacggctctggagtat
ggtctgccaccaaccgctggctggggaatgggcatcgatcgtctcaccatgttcctgacc
gactccaacaacatcaaggaggtgctgctgttccctgccatgaagcctgacgacaacaag
tcatcagcacccgtagagggcacgtctgtctaa
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