Hippoglossus stenolepis (Pacific halibut): 118111019
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Entry
118111019 CDS
T08308
Name
(RefSeq) neural cell adhesion molecule L1-like protein isoform X1
KO
K06758
L1 cell adhesion molecule like protein
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hsp04515
]
118111019
Cell adhesion molecules [BR:
hsp04515
]
Immunoglobulin superfamily
L1 family
118111019
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
fn3
Ig_2
Bravo_FIGEY
V-set
FN3_DSCAM-DSCAML_C
Ig_5
Pur_ac_phosph_N
C2-set_2
Ig_6
V-set_CD47
Fn3_Dep-1_3rd
Motif
Other DBs
NCBI-GeneID:
118111019
NCBI-ProteinID:
XP_035015153
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All DBs
Position
6:15694128..15752186
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AA seq
1302 aa
AA seq
DB search
MRLAGSLQLVLFLALTSRAAGLSIPLEVEQPPTIINQTSGPVIVLPFDHFITIRCEARAN
PPPQYRWTKDGEDFTPPYITTNNTGGTFVLHFKHLTQFQGKYRCYAFNKLGTAITEEIEL
MVLNIPKFPKEEIDPVVVQEGEPIILKCNPPQGMGRRQIYWMTIDLKQIEQDDRVSMDVD
GNLYFSNALQTDSRQDYCCFVAFSIIRGITQKSPMAVVVKSFEAPPVRKAGLLLPSGVQT
EKMLLKGRDLKLECIPEGFPTPTVKWIKLGEDLPPRKKLEKFGKLLAISAVEERDQGKYM
CTAENSGGKVVHYFDVIVEEPPKWLTEPPQSQLTVIGSDVHIKCSVSGKPLPDITWRRNG
ELFEDDPESNRRVLDDTVVLHNARKEDSAVYQCEASNTHGSILANINIMVMNVAPLILTR
DYQEYDVILGDHIIMDCTVFSSPPATITWAKDDAPETIKGERFLSLQNGALQIIRAEKDD
SGVYVCAAFNTEGELTVTALLDVKDPTKIVDPPQDVEIISGSTAQLTCQAEYDKTLRSSF
EVVWIKDGEEILTSFEEKPRYFMDDGLLQIMNVNLSDQGIYTCIARTSLDEDNATALLTV
LDVPDAPKNIALLELKVPRNVSLSWKPGSDHNSSVTEFIVEYEESQWEPGRWRELQKVPG
NQATAELALNGHLNYQFRVYAVNAVGPGPPSEPTERYKTPPAAPDRNPENIKIQGHLPHQ
MDITWEPLLPIEHNGPGLEYKVNYRKLGVEDNWKDHMEKRHSFVLRNTSTFVPYEIKIQS
RNSHGWGPEPKVVTGYSGEDVFFWHCLRENVSVPTAAPRDIAVEVINTTVLRVSWTPVPP
ATVRGHLGGYNVHWMRKHSLLNPNKSFDDRQSLSFPGKRSHAIVPSLKPFTEYRLIVNVF
NKKGNGPNSDPVTFNTPEGVPEQVPILTASNAQKDSILLVWGPPPEANGILTGYLLQHHL
INETTLEVVDSQETNITGADTTQWQLHGLQEGSLYRFHLSACTRAGCGPPLAQESNTIAP
EHLSLTPAVAPIQSTHNCSLSFPTSMPGNSTHLSLVPALLNISSYVSDTFAKISWTAREE
QQDSQLYVAYMNNRDGNWWISEAVNTSQSFHVIDGLTPGTVYTVRLMAKGLLDNASLFED
VIQTQVKGVEGQQRNTSTQGWVIGTMCAVALLTLVALMACFVRRNKGGKYAGTPPLRRRP
DMFSMEKVKEKEDLHPDVESQGMNDDTFCEYSDSDEKPLKGSSLCSLNGNDTVGDSVSRD
SLVDYADGEGEFNEDGSFIGEYSGRRHRGSVSEPSGPGPVTA
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atgaggttggcagggagccttcagctggttctgtttctggccttgacctccagagccgca
ggcctcagtatccccctggaagtggagcagcctcccaccataataaatcaaacatcaggt
cccgtcattgtccttcccttcgaccactttatcaccatcaggtgtgaagccagggccaac
ccaccaccacaatacagatggacaaaagatggcgaggactttactcctccatacatcaca
acgaacaacacaggtggaacttttgtgcttcacttcaaacacctcacccagttccagggt
aaatacagatgctacgcctttaacaaactgggaactgccataacagaggagattgaactg
atggttctcaatatccctaagtttccgaaggaggaaattgatccggttgttgttcaggag
ggagagccaatcatcctgaagtgcaaccctccgcagggtatgggacggcggcagatctac
tggatgactattgatctcaagcaaattgagcaggatgacagggtgtccatggacgtcgac
ggcaacctgtacttctctaacgccttacagacagacagtcgtcaggattactgctgcttt
gttgccttctccataattcgcggaattacccagaagtcccccatggctgtcgtggtcaag
agctttgaagcccccccagtgagaaaagctggcctgctgctgccctctggtgttcagaca
gagaagatgctgttgaaggggagagatctgaagctcgagtgcataccagagggatttccc
actccgacggtaaaatggataaaactgggggaagacctgcctccgcggaagaaattggaa
aaatttggaaagctgttggccatctctgctgtagaggagagggatcaggggaaatatatg
tgtaccgcggaaaactctggtggaaaggttgtccactactttgatgtcatagtggaagag
ccgccaaagtggctgacagagcctcctcagagccagctgactgtgatcgggtctgacgtt
cacatcaagtgctcggtcagcggaaaaccactgccagacataacgtggaggaggaacgga
gaattgttcgaagatgaccctgagagcaacaggcgagtgctggacgacactgtggtgctg
cataacgccaggaaagaggacagtgctgtgtaccagtgtgaggcctccaacactcatggc
agtattctggccaacattaacatcatggtcatgaatgtggctcctctgatattgacgcgg
gactaccaagagtatgatgtaatacttggtgatcacatcatcatggactgcactgtgttc
agctctccaccagcgaccatcacttgggccaaagacgatgctccagaaactatcaaggga
gagcgatttttgtctctgcagaacggagcgttgcaaatcatcagagcagaaaaagacgac
agcggggtttatgtgtgtgccgcctttaatacggagggggagttgaccgtcactgctctg
ctggatgtgaaagaccctacgaaaatagtagatccgcctcaggacgtggagatcatcagt
gggagcacagcccagttgacgtgccaggcggaatatgataaaaccctgcggagcagcttc
gaagtggtgtggataaaggatggggaggagatcctgacttcctttgaggagaagcccaga
tacttcatggatgatggcctgctgcagatcatgaatgtgaacctgagtgatcaaggaata
tacacatgcatcgctagaaccagtctggatgaggacaatgccactgcactactcacagta
ctggacgttcctgatgctccaaagaatatagcgcttttagaacttaaggtcccaaggaac
gtctccttgtcttggaaacctggaagtgatcacaacagctctgtaacagaatttatagtg
gagtacgaggagagccaatgggagcccggcaggtggagggagctacagaaagtccccggt
aaccaggcaacagccgagctggcactaaatggacaccttaactaccagttcagagtgtat
gccgtgaacgccgtcggacccggaccccccagtgagcccactgagagatacaaaacaccc
cctgctgctcctgataggaacccggagaacatcaaaattcaaggacaccttcctcatcaa
atggacatcacctgggagccgctgctgccgattgaacacaacggcccaggcctggagtac
aaggtgaactacaggaaactgggggtggaggacaactggaaggatcacatggagaaaaga
cactcgtttgtcttgaggaacacgagcacgttcgtcccgtacgagatcaaaattcagagc
aggaacagccacgggtggggacctgaacccaaagtggtcacgggttactctggagaagat
gtgttcttttggcattgtctgcgggaaaatgtgtcagttccgactgcagcgccgcgggac
atagcggtggaggtgatcaacaccactgttctgagagttagctggaccccggttccacct
gccacagtcagaggtcatctcgggggctacaatgttcactggatgaggaagcacagtctg
ctgaatcccaacaagagttttgatgaccgccagtcgctgtccttcccagggaagaggagt
catgccatcgtaccgagtctcaaacctttcaccgaatacagactcattgtgaatgttttc
aacaagaagggcaatgggcccaacagtgacccggtcaccttcaacactccagagggagtt
cctgaacaagtgcctatcctgaccgcctccaacgcgcagaaagactccattttgctggta
tggggaccccccccagaggcgaacggcatcctcactggttatctcctgcagcaccacctc
attaatgagaccacacttgaggtggttgactcccaggagacgaacatcaccggggctgac
accactcagtggcagctccacggcctgcaggagggcagcctctaccgcttccacctcagc
gcctgcactcgggcaggttgcggacctccgctcgcccaggagagcaacacgatcgctccg
gaacatttgtccctgactccagctgtggcccctattcagagcacccacaactgctctctc
tcctttccaacctctatgccaggcaattctactcatctttccttagttccggccctgttg
aacataagctcctatgtgagtgacacctttgccaaaatcagctggactgccagagaagag
cagcaggactcacagctttatgtggcttatatgaataaccgtgatggtaactggtggatt
tctgaagccgtaaacacttctcaaagtttccacgtaattgatgggctcacacccgggacg
gtgtacactgtgcgcctcatggccaagggactacttgataacgctagccttttcgaggac
gttatccagactcaagtcaaaggtgtggaaggtcagcagagaaacacctcgacccaggga
tgggtcattgggaccatgtgtgctgtggcactcctcacccttgtcgcactcatggcttgc
tttgtgcggagaaacaaaggtggcaaatatgcaggtacgccaccgctgcgccggcgacca
gacatgttctccatggaaaaagtgaaagagaaggaggacctccaccctgacgtcgagtca
caaggaatgaatgatgacaccttctgtgaatacagtgacagcgacgagaaaccactgaag
ggcagtagcctatgttccctgaatggcaatgacacagtcggggacagcgtcagcagagac
agcctggttgactacgccgacggtgaaggggaattcaatgaagacggctcatttattgga
gaatattctggacgcaggcacagaggttcagttagcgagcccagcggacccggcccagtc
actgcataa
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