Hippoglossus stenolepis (Pacific halibut): 118111035
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Entry
118111035 CDS
T08308
Symbol
bgnb
Name
(RefSeq) biglycan b
KO
K08118
biglycan
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118111035 (bgnb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
hsp00535
]
118111035 (bgnb)
Proteoglycans [BR:
hsp00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class I
118111035 (bgnb)
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Motif
Pfam:
LRR_8
LRR_4
LRRNT
LRR_1
LRR_14
LRR_9
LRR_5
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
118111035
NCBI-ProteinID:
XP_035015192
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Position
6:complement(11393505..11408739)
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AA seq
372 aa
AA seq
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MLPHCSLLLLLCVARLLPASSALPFEQKGFWDFAMDSMDSGGLMAMMRDEEEGSAVEEVL
PPDIHMCPFGCQCHLRVVQCSDLGLTEVPKNIPSDTKFLDLQNNRITELTENDFKGLTHL
YGLSLRNNLISKVHPRTFVPLKHMQKLYFSKNLLTTVPKNLPASLVEIRIHENRIKKVEA
GAFTGLVNMNCIEMGANPLQNSGFEPGAFKGLKLNYLRISEAKLTGVPKDLPESLNELHL
DHNQIQAIELEDLSRYKNLYRLGLGFNHIRNVENGSLSYLPRLRELHLDNNRLTGVPRGL
PDMKYLQVVYLHSNNINQVGVNDFCPRGFGMKRTFYNGISLFSNPVNYWEVQPATFRCVS
DRLAIQFGNYKK
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgttgccacattgctccctcctgctgttgctatgcgtggcccggctgctccccgcctcc
tcggccttgcccttcgagcagaaaggcttctgggattttgcaatggacagtatggacagt
ggcgggctgatggcgatgatgagggatgaggaagaaggttcagctgtggaggaggtcctc
cccccggacatacacatgtgccccttcggctgccaatgtcacctccgggtcgtccagtgc
tctgacctcggtctgaccgaggtgcccaagaatattccttcggacaccaagttcctggac
ctgcagaacaaccgcatcaccgagctaacggagaatgacttcaaaggcctcactcactta
tatggtctgtctctgaggaataaccttatttccaaagtccaccccaggacatttgtccct
ctgaagcacatgcagaagctgtacttctccaaaaacctgctgaccaccgtccccaagaac
ttgcccgcctctctggtcgagataaggatccacgagaaccgcatcaagaaggtggaagct
ggagccttcacagggctggtcaacatgaactgcatagagatgggagcaaaccctctccag
aacagcggtttcgagcctggagccttcaagggactgaaactcaattatctgcgtatttca
gaggccaaactgaccggggtgccaaaagatctgccagagagtctcaatgagcttcatctt
gaccacaaccagatccaggctatagaactggaggacctgagccgctacaaaaacctgtac
aggctgggcctcggtttcaaccacatccgtaacgtagagaacggcagtctgtcctacctg
cccaggctgagagagctgcatctggacaacaaccgcctcaccggtgttcccagaggcctc
ccggacatgaaatacctgcaggtggtgtacctgcattccaacaacatcaaccaggtgggc
gtgaacgacttctgccctcgaggattcgggatgaagaggacgttctataatggcatcagc
ttgttttctaaccccgtcaattactgggaggtgcagcctgccacgttccgctgcgtcagc
gaccggctggctattcagttcggcaactacaaaaagtaa
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