Hippoglossus stenolepis (Pacific halibut): 118111104
Help
Entry
118111104 CDS
T08308
Symbol
lamb2l
Name
(RefSeq) laminin subunit beta-2
KO
K06243
laminin, beta 2
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04510
Focal adhesion
hsp04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118111104 (lamb2l)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118111104 (lamb2l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
F5_F8_type_C
RasGEF_N_2
Oscp1
Laminin_II
Motif
Other DBs
NCBI-GeneID:
118111104
NCBI-ProteinID:
XP_035015327
LinkDB
All DBs
Position
6:complement(23765025..23823997)
Genome browser
AA seq
1848 aa
AA seq
DB search
MHPDILMPIMTVQLSLLMLALSVFGQDLPSGPHGCTDGSCYPATGNLLIGRAVNLTATST
CGLGGPEHYCIVSHLQESDKCFECSSQHRYDPYRHRNSHRIENVINLMDNIGSNTWWQSV
NGQENVNIRLNLEAEFHFTHLIMKFKTFRPAAMIIERSADFGRTWRPYRYFASNCTRTFP
GVSSNGLHHINDIICEERYSDIEPSTNGEVIYKVLDPAIHVRDPYSLDIQELLRITNLRI
NFTKLNTLGDDLLDRRFDVLQKYYYALYELVVRGSCFCYGHASECAPVPGVDARENGMIH
GRCVCKHNSEGLNCERCKDFHHDLPWRPAEAENPHTCRECNCNGHSNQCHFDMAVYLATA
NYSGGVCDDCQHNTMGRNCEMCKPFYSQDQIRDIRDPRVCVACDCDPVGSLEGGVCDSHT
DPDMGMISGQCRCKANVKGTRCDDCKEGYYGLSQNDPLGCQPCNCDPRGIIMMGAPCDQI
SGDCSCKRYVTGRYCNQCLPEYWGLSNDLAGCRPCDCDFGGAFNNRCMMENGQCDCRRHL
IGRQCSEVQPGYFCAPLDYYKYEAEDATGHSPSDPALPGKVRPQAETDCVQHLSNQLRRH
RRHRRITNSQQHRAALRRIRQLQQTPDVRTVHREHSPSHMVTWTGPGFARVKDGAGLVFT
IDNIPYAMEYDIMIRYEPESTEDWEAVVSITSVLLPSSLRCGNLLPTEQLYTVTLPHRNR
YIQMPRPFCFEPSNRYVVAIRFQRHGVSHRHLTAFILIDSLVLIPKYTELPGFQGNEPEA
EQRREEMIRYMCLDSFMITPMPALAEMCSKLICSISSIIHDGALSCQCDPQGSLSGECGR
VGGQCQCKPNVMGQHCDQCAPGTYGFGVNGCTACDCHSEGSLSHQCDPVTGQCQCRQGAT
GRMCSDCQPGQWGFPSCIPCQCNGHADLCDPSTGECRDCRDYTVGQLCERCVDGFFGNPV
LGSGEHCRPCPCPGNPGSDHFNGHSCQADHSTNQIICNCKQGYTGSRCDQCAPGYYGNPD
QPGGQCLPCECSGNIDTQDFESCDPRTGQCLKCLYNTDGPSCAHCQHGYYGNALTQDCRR
CTCVTAGTIQSACSDGQCHCDRQTGACPCRENVAGNNCDQCAPNHWNYGQDRGCEPCHCD
SQHALGAHCNMFTGQCHCRPGFGGKQCTECEQFHWGDPQVQCQECNCHPLGSEMAQCDRT
TGVCECREGAAGKQCDECARGFTDAFPKCVRCHPCFQLWDDAVCQNKRDLDHIQYTVQKI
LESGVTPGVDDTRIKELEMKLKQVQDLISGDDNDRIHQLIGQSIDDLRAEIALTDGRLMG
VTRELNTTAAEEEALRRTLNDLERELRDINTTVAHKQRVIDDYLTSGFADQFEKIKKYYR
QSFEAEQKCNASVYSPSGAVEQSKETRALTEGLLDASRDKFLRSLAAQNKSLNELQQKAH
NLDEKVHLLSHKVCGGHSNDSVNGSCPDSQCGGAGCRDDQGNRVCGGNGCNGTVSASVAA
LNQAGLARNGLNAANEELQGVAKKLQDIAFLTQDVKNQAMNTLEKARKKKDQFENNNKKL
KDFIKKIRDFLTEEGADPESIEKVALQVLAIKLPFNKTTLDNMVMKIKDGLSNLTNMEDI
VNQTSQHISKAKELLEKAQQAKRRAEGVEDKVNSTKQALDVSEKAIEKARTTLEEANNNL
NSTRQATAEVEERLDQLEDKQMDVMMRLNNLSMGVEALRNKTEQNRQMAKNAKALANNAT
DMASSLEQSFNHTEKRYHELRMKVDSLGAESGDLNSINQMAKDMKKEADDLLNKAKNGIK
QLEKLEKKLKNNKQRMERQGLELDELKENATVVRDEIRDQVQKYSNCV
NT seq
5547 nt
NT seq
+upstream
nt +downstream
nt
atgcatccagacatcctgatgcccatcatgactgtgcagctgagcctcctcatgctggct
ctcagtgtctttggacaagaccttccatcaggccctcatggctgcacagacggaagctgc
taccctgcgacaggaaaccttttgatcggacgtgctgtcaacttaactgccacatccaca
tgcggcctgggcgggcctgagcactactgcatcgttagccatctgcaggagtcagacaag
tgtttcgagtgcagctcccaacaccgctacgacccgtaccgccacagaaacagccaccgc
attgaaaacgtgatcaacctcatggacaacattggaagcaacacctggtggcagtctgtc
aacggacaggagaacgtgaacatcagactgaaccttgaggccgaattccacttcacacac
cttatcatgaagtttaagacgttccgacctgcagctatgatcatcgagcgttcagctgat
ttcgggcgtacatggcgcccctaccgatacttcgcctccaactgtaccagaaccttccct
ggcgtctcttccaatggccttcaccacatcaatgacatcatctgcgaggaacgctactct
gacattgagccctccactaatggagaggttatttataaagtgttggatcctgccattcat
gtgagagacccatacagtttggacattcaagaacttctgcgaatcaccaacctacgaatc
aactttaccaagctaaacactctgggagacgacctgctggatcgacgttttgacgtcctg
cagaaatattattatgccctctatgagctggtggtcagagggagctgcttctgttatggt
cacgcctcagagtgcgccccagtgccaggggttgacgcccgggaaaacggcatgatccac
ggccgctgtgtatgcaagcataattcagagggcctgaactgtgagcgctgcaaagacttc
catcatgacctgccctggagaccagcggaggcagagaaccctcacacatgcagagagtgt
aactgtaacggccactcgaaccagtgccactttgacatggcggtgtatttggccacggct
aactatagcggaggagtgtgcgatgactgtcagcacaacaccatgggacgcaactgtgag
atgtgcaagccgttctactcccaagaccaaatcagggatatcagggatccacgggtttgt
gttgcctgtgactgtgaccctgtgggctcactggaggggggtgtgtgtgacagtcacacc
gacccagacatggggatgatctcaggacagtgccgctgcaaagccaatgtgaaaggcacg
cgctgcgacgactgcaaagagggttactatggactcagccagaacgaccctctgggctgc
cagccttgcaactgtgaccctcgtggtatcattatgatgggagctccttgtgatcagatc
agtggggactgctcctgcaaaagatatgtcacaggacgctactgcaaccagtgtctgcct
gaatactgggggctcagtaacgacttggccggctgcagaccctgtgattgtgactttggt
ggagccttcaacaacaggtgcatgatggaaaatggccagtgtgactgcaggagacatctg
attggtcgacagtgctcagaagtgcagcctggatatttctgtgctccgctggactactac
aaatacgaggctgaagacgccaccggacactcccccagtgaccctgcgctgccgggcaaa
gttcgtcctcaggcagagaccgactgcgttcagcacctcagcaaccaactgaggcgtcac
cgccgccaccgccgcatcaccaactcgcagcagcatcgggcggcgctgagacggatccgc
cagcttcaacagacaccggatgtgaggaccgttcacagagagcactctccgagccacatg
gtgacgtggacaggacctgggttcgcccgcgtcaaagatggtgctggcctggtcttcact
atcgacaacatcccctacgccatggagtacgacatcatgatccgctacgaacccgagtcg
acagaggactgggaggccgttgtcagtattacttcagttctgctaccctccagtctccgg
tgtggaaaccttctcccaactgaacagctctacactgtaacactgccacaccgcaatagg
tatatccagatgcccaggccattctgcttcgagcccagcaaccgttacgtggtggcaatt
aggttccagcgccacggtgtctcacacagacatcttacagccttcattcttattgactcg
ctggttctgattcccaaatacactgagcttcctggtttccaaggtaatgagccagaggcc
gagcagcggcgggaggagatgattcgctacatgtgtctggattccttcatgatcacaccg
atgcctgccctggctgagatgtgctccaaactcatctgtagtatttcctccatcattcat
gacggcgctctgtcctgtcagtgtgacccacagggttccctcagtggggagtgcggcaga
gtgggaggtcagtgtcaatgtaaacccaacgtcatgggtcaacactgtgaccagtgtgcc
ccaggaacctacggctttggagtgaatggctgcactgcctgcgactgccactctgagggt
tcattgagccaccagtgtgacccagttacaggccagtgccagtgtaggcagggagccact
ggacggatgtgctctgactgccaaccaggccagtggggcttccccagctgcatcccctgt
cagtgcaacggccacgcagacctctgtgaccccagcaccggggagtgtcgagactgcagg
gactacacggttggacagctctgtgaacgttgtgtggatggcttctttgggaacccagtg
cttggctcaggggaacactgtcggccctgcccctgccctggaaaccccggctcagatcac
tttaacggacactcctgtcaagctgaccacagcactaaccagatcatctgcaactgcaag
caaggctacactggatcccgttgtgaccagtgtgcccctggttactatggtaatccagac
cagcctggggggcagtgcctaccatgcgagtgtagcggcaacatcgacacccaggacttt
gagtcatgtgaccccaggaccggccaatgccttaagtgcctgtacaacaccgacggcccc
tcctgtgcacactgtcaacatggttactatggaaacgctctgacccaagactgcagacgt
tgtacctgtgtgactgctggcactatacagtctgcttgcagtgatggacagtgtcactgt
gaccggcaaacaggagcctgtccttgcagggagaacgtggctggaaacaactgtgaccag
tgcgctccgaaccattggaactacggtcaggaccgaggctgtgagccctgtcactgtgac
tcacaacacgctctgggtgctcactgcaacatgttcacaggccagtgccactgtcgtcca
ggctttggaggcaaacagtgcactgagtgtgagcagttccactggggcgaccctcaggta
cagtgtcaagagtgtaactgtcatccgctgggctcagagatggcccagtgtgacagaacg
acgggagtatgcgagtgccgggagggagcagcggggaagcagtgcgatgagtgcgctcga
ggcttcacggacgctttcccaaaatgtgtccggtgtcacccgtgctttcagctgtgggat
gatgctgtgtgccagaacaaaagggacttggatcacatccagtacaccgtgcagaagatc
ctggagagcggggtcacgccaggagtagatgacacgcgcatcaaagaactggaaatgaag
ctgaagcaggtgcaggatctgatcagtggggacgacaacgacaggatccaccagctgatt
ggacagagcattgatgacctcagggctgagattgcactgacagatggccgtctgatgggc
gtcacccgagagctaaatacaacagcagcagaagaggaggcactgagacgtacactgaat
gatctggagagagaactgagggacatcaacaccactgtggctcacaaacagcgtgtgatc
gatgactacctcacctcaggatttgcagatcagtttgagaaaatcaagaagtactatcga
cagtcattcgaggctgagcagaaatgcaacgcttcagtgtacagcccctctggtgcggtg
gaacagtccaaagaaacccgcgctcttactgaaggcctgctggatgccagtagagacaag
ttcctccgctctctggctgctcagaacaaatcattgaacgagctgcagcagaaggctcac
aacctggatgagaaggttcatctcctcagccacaaggtatgtggtggtcacagcaatgac
agcgtaaatggcagttgcccagacagccagtgtggtggtgctggttgccgagacgatcag
ggtaatcgtgtgtgtggaggaaacggatgcaacggaacggtgagcgcctccgttgctgcc
cttaatcaagctgggctcgccagaaacggtttgaacgctgccaatgaggagctgcagggt
gtcgcaaaaaagctccaggacatcgcctttctgacgcaagatgtgaagaaccaggcgatg
aacacgctggagaaagcccggaagaagaaagaccagtttgaaaacaacaacaagaagctc
aaagatttcattaagaagatcagagattttctcactgaggagggagccgatccagagagc
atagagaaagtggctctgcaggtgttggcgatcaagctgccgttcaacaagaccacgctg
gacaacatggtcatgaagataaaggacggcctgtccaacctcaccaacatggaggacatt
gtcaaccaaacctcgcagcacatcagcaaagccaaggagctgcttgaaaaagctcaacag
gccaagaggcgagcagaaggagtggaggataaagtcaatagcacgaagcaggcgttggat
gtgtctgaaaaggccatcgagaaagcacgaacaaccctggaagaggccaacaataacctg
aacagcacgaggcaggcgactgcggaggtggaggagaggctggaccagctggaggataag
caaatggacgtcatgatgcgtttgaacaacctctctatgggggtggaagctctgaggaac
aagacggagcagaacagacagatggcgaaaaacgccaaagccctggctaacaacgccact
gacatggcgtcctcactggagcagagcttcaatcacacagagaagcggtaccatgagctg
cggatgaaggtggactctcttggtgctgagtcaggagatttgaacagcatcaaccagatg
gcgaaggatatgaagaaggaggcagacgacctcttaaacaaagctaagaacgggataaaa
caactcgagaaactggagaaaaagttaaagaataacaagcagcggatggagaggcagggc
ctggagctggacgagctgaaggaaaacgccaccgtggtgcgggacgagatccgggatcag
gtgcagaagtactctaactgtgtgtga
DBGET
integrated database retrieval system
