Hippoglossus stenolepis (Pacific halibut): 118111113
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Entry
118111113 CDS
T08308
Symbol
lrrc4cb
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
118111113 (lrrc4cb)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_14
ig
V-set
LRR_9
Ig_2
LRRNT
Ig_6
Syndecan
Motif
Other DBs
NCBI-GeneID:
118111113
NCBI-ProteinID:
XP_035015385
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Position
1:4918566..4959314
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AA seq
630 aa
AA seq
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MLNTMISSLQRQTMRGRRLKGALSNPLFVLLLALQILVVAGLVRAQTCPSVCSCSNQFSK
VICTRRGLRDVPDGISTNTRYLNLQDNLIQVIKVDSFKHLRHLEILQLSKNHIRNIEIGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISDGAFKDLSNLRYLNLGMCNLKEIPNILPLVRLEELEMSGNQLAVVKPSAF
TGLVNLQKLWMMHAQIQTIERNSFDDLQSMVELNLAHNNLTFLPHDLFTPLHRLERVHLH
HNPWNCNCDILWLSWWLKETVPANTSCCARCHSPSAFKGRYIGELDHSYFQCDVPVIVEP
PSDLNVTEGMAAELKCRTSSLTSISWLTPNGSLVTHGAYKVRLSVLNDGTLNFTSVTMQD
TGTYTCMVSNTAGNISASAVLNVTSVENSGVTYFTTVTVETIETPGDDSQTPYPPFGWTS
STTKGTPVSTRTTERTYTIPVIDLDGEGALNGLDEVMKTTKIIIGCFVAITLMAAVLLVI
FYKMRKQHNQQDPDGPASSMEVITVEEELAGVAAMERHLSLPPLEHYNHYNTYKSTYHHP
SMLSTIHSSATQEPLLIQACSKDNVQETQI
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacacaatgatctcctccctccagcgccagacaatgagaggtcgtaggctgaag
ggggcgctgtccaaccccctctttgtgctgctgttggcccttcagatcctggtggtggcc
gggctggttcgtgctcagacctgcccgtccgtctgctcatgcagtaaccagttcagcaag
gtcatatgcacccgccgaggtctacgggacgtccccgatggcatttccaccaacactcgc
tacctgaacctccaggacaacctcatccaggtcatcaaggtggacagttttaaacatctg
cgccatctggagatcctgcagctgagcaagaaccacattcgcaacattgaaattggtgcc
ttcaatgggttagccagtctcaacactttggagctctttgataatcggctcacgacaatc
cccaatggagcattcgagtacttgtccaagctgaaggagttgtggctccggaacaacccc
attgaaagtataccatcatatgccttcaatcgagtcccctcgcttcgaaggctagatcta
ggtgagctcaaacgtctctcctacatttcagacggagctttcaaggacttaagcaacctg
cgctacctgaacctgggaatgtgcaacctcaaggagattcccaacattttaccgttggtc
aggctcgaagaactagaaatgtcaggaaaccagctcgctgttgtcaagcccagcgcattc
acgggattagtgaacctccagaagctgtggatgatgcatgcccaaatccaaactatcgag
aggaactcattcgatgacctgcagtcaatggtggagctcaacctggctcacaacaacctc
acctttctaccacatgacctcttcacgccattgcatcgcctggagcgggtccacctccat
cacaacccttggaactgcaactgtgatatcttgtggctcagctggtggctgaaggaaact
gtacctgccaacaccagctgctgtgcacgttgccattctccttcagcttttaaaggtcgc
tacattggggaactggaccacagctacttccagtgcgatgtccccgtcatcgtggagcca
cccagtgacttgaatgtgacagagggaatggctgcggagcttaaatgtcgtacgagctcg
ttgacgtccatcagctggctcacaccaaatggctcattggtgacacacggggcttacaag
gtgcgtttgtctgtactcaatgacgggacactgaactttactagcgtcacaatgcaggac
actgggacgtacacctgtatggtcagtaacacagcaggcaacatttccgcctctgctgtc
cttaatgttacttccgtggaaaacagtggtgtgacctatttcaccacagtcaccgtggag
accattgagacaccaggggacgatagccaaacgccgtatcccccgttcggctggacgtcc
tcgacaacaaaaggaactcctgtgtccacgaggaccacagagcggacttacaccattcca
gttattgatctggatggagagggagccctcaacggcctggacgaagtgatgaaaaccacc
aagattatcatcggctgcttcgtggccatcacgctcatggctgccgttctcctggttatt
ttctacaagatgaggaagcagcataaccagcaggatcccgatggcccggcctcctctatg
gaggtcattactgttgaagaagagcttgcaggggttgcagccatggagagacacctatcg
ctgccccctctggagcactacaaccactacaacacctacaagagcacttaccaccacccg
tccatgctcagcaccatacacagctctgccacacaggaacctttactgattcaagcctgc
tcaaaagacaatgtacaagagacccaaatctga
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