Hippoglossus stenolepis (Pacific halibut): 118111120
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Entry
118111120 CDS
T08308
Symbol
arhgef25a
Name
(RefSeq) rho guanine nucleotide exchange factor 25 isoform X1
KO
K20690
Rho guanine nucleotide exchange factor 25
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118111120 (arhgef25a)
Membrane trafficking [BR:
hsp04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
118111120 (arhgef25a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3-RhoG_link
PH
PH_19
PH_10
Motif
Other DBs
NCBI-GeneID:
118111120
NCBI-ProteinID:
XP_035015351
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All DBs
Position
6:13029309..13076019
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AA seq
734 aa
AA seq
DB search
MKALQKNQGRTDQMLGAMADVLTSVAMPNQQWLSEGGEADLPSSEDEKGPVQGLWEPEGL
EWEQQAAATTNTENPERREKTDSYSAAGSEGSISTSVASLPPQASGSSAPSSPGSRRSVS
TLKKWLTNPVRKLSAGATAKGERQVRKLEGKSPSLPSQSHGQDLGNPPRPDDTLTILPVT
HRELEWKDGLASPEDLSPATLQSPSYITDSLIGCTSLPNTQDTQSTNVLPDDSGSVLMDD
TCSQWSAAADTEEERRSALEKSLYVLKELVETENHYVGDLGFIVEGYMATMSSKGIPEDM
KGKDKIVFGNIHQIFDWHKDYFLGELEKCLAEPERLAQLFIKHERRLHMYVVYCQNKPKS
EHIVSEYIETYFEELRQQLGHRLQLNDLLIKPVQRIMKYQLLLKDFLKYYTKAGMDTEEL
EKAVEVMCFVPKRCNDMMNVGRLQGFEGKITAQGKMLQQDTFTVTEQDSSFLSRAKERRI
FLFEQLVMFSEPIDRKKGFSLPGYIFKNSIKVSCLGMEPSVDGDEARLVLTSRNPDGSVV
RFQLQASSPDICRAWVNDVMQILDSQRNFLNALQSPIEYQRRESKSNSLGRCMRPPLSAA
CALRPHSSASIDRHKLPSLHSHNTSLPTLYLPSQGPGPGSNDTYSARDPTVVQPCPADPH
TVSLSHVQLGFTDQPNCQAVSNGLYTPTTQSAQQRAGEACRRGQPVDAGSQGPLSGFSAG
RRPSNLAQLDEDDL
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgaaggctctgcagaagaatcagggacgcaccgaccagatgttgggagccatggctgac
gtgctgacttctgtggccatgcccaatcaacagtggctctcagaggggggtgaggcggac
ctcccatcaagcgaggatgaaaaggggcctgtccagggcctgtgggagccggaggggctg
gagtgggagcagcaggccgccgccaccaccaacacagaaaacccagagcggagagaaaaa
acagactcgtactcagcagcgggcagcgagggcagcatctccacctctgtggcgtccctg
ccccctcaggcttcgggcagctcggcccccagctctccgggctccagacgttctgtgagc
accctgaagaagtggctcacgaaccccgtccgcaaactcagcgccggggctactgccaaa
ggagagcgccaggtccgcaaactagaaggaaaatctccgtctcttccatcccagagccac
ggccaggaccttggcaaccccccgaggcctgatgacaccctcaccatcctgcctgtcacc
cacagagaactggagtggaaagatggcctggccagccctgaggacctgtcacccgctaca
ctgcagtcccccagctacataactgactccctcattggctgcacatccctgccaaacact
caggacacgcagtccaccaatgttttgccggacgacagcggctccgtgttgatggatgac
acctgcagccagtggtcggctgctgcggacactgaggaggagcggagaagtgccttggag
aaaagcttgtatgtactgaaggagcttgttgagacagagaaccactacgtgggagacctg
ggattcatagtggagggttacatggccaccatgagctccaaaggaataccggaggacatg
aagggaaaagacaagattgttttcggaaacatccaccaaatatttgactggcacaaagac
tacttcctgggagagctggagaagtgtttggcagagccagagaggctggctcagctcttc
attaaacatgagaggcgtctgcatatgtacgttgtgtactgtcagaacaagcccaagtcg
gagcacattgtctccgagtacatcgagacttactttgaggagttgcggcagcagctcggc
cacaggctgcagctcaatgacctgctcatcaagcccgtccagaggatcatgaagtaccag
ctgctgctcaaggacttcctgaagtattacaccaaagctgggatggacacggaggagttg
gagaaagcagtggaggtgatgtgctttgtgccaaaacgttgcaacgacatgatgaatgtg
ggcagactacaaggcttcgagggtaagatcacagctcagggcaaaatgctccagcaagac
accttcactgttacggagcaggacagtagcttcctctcccgggccaaggaaagacggatc
ttcctgtttgagcagctggtcatgttcagtgagccaatcgacaggaagaaaggcttctca
cttcctggatacatcttcaagaacagcatcaaggtgagctgcctaggaatggagcccagc
gtggacggcgatgaagcccgcttagtgctgacttcacgcaaccccgatgggagcgtggtg
cgcttccagctgcaggcctcctccccggacatctgcagggcctgggtcaatgatgtgatg
cagatcttggattcccagcgtaactttctcaatgccttacagtcgcctatcgagtaccaa
cggcgggagagcaagtccaacagcctcggccgctgcatgaggccccctctgtctgctgct
tgtgccctgcggccccactcctccgcctccatcgaccgccacaagctgccgtcccttcac
tcccacaacacctccttgcccaccctctacctgcccagccaaggcccgggcccaggatcc
aacgacacgtactcagcacgggaccccactgtggtccagccgtgccctgctgatccccac
actgtttctctctcacacgtccagctgggcttcactgatcagccaaactgtcaagctgtg
tcaaatgggctgtacacacccaccacacaaagtgcacagcagagagcaggagaggcctgc
cgaaggggtcagcctgtcgacgctgggagccagggtccactgtcgggtttctcagctgga
cgacgccccagcaacctggcccagctagacgaggatgacctatga
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