Hippoglossus stenolepis (Pacific halibut): 118111174
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Entry
118111174 CDS
T08308
Symbol
ccdc187
Name
(RefSeq) coiled-coil domain-containing protein 187 isoform X1
KO
K25949
coiled-coil domain-containing protein 50
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118111174 (ccdc187)
Membrane trafficking [BR:
hsp04131
]
Autophagy
Other autophagy associated proteins
Others
118111174 (ccdc187)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC50_N
Motif
Other DBs
NCBI-GeneID:
118111174
NCBI-ProteinID:
XP_035015452
LinkDB
All DBs
Position
6:complement(5616618..5635569)
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AA seq
833 aa
AA seq
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MKLEASHSSSASMTPPSAPPSAPPSAPPSAPPSAPPAMCQCFAVLEDGAMAHNLQEQEIE
QYYSTNIQKNQLVQNDIRVAKRLQDEEDDQRAQQSADLRQASRQLEEQDLEYARVIQEEL
QRCAEEAHRREQDDEEIAKRMQEEEEKRIRARSRGQEGHSEDSAGDSALPASHQHTLSSQ
RGEQCSSTTTRWQYSTSHNHSDLTGAVPPRGPVARESTTSGSNQGCTDSIRPIREELSED
SEDTDTVFSAQLSVWSQRPNRRLNTAPPQRRAASHYPQERNYRSLNSRSSITDDFRGWNE
ERGEGDEDYYDNECYDREKKRHGNRQQERSHREEYEGWHRSKDQERDSRSVEVREKRCSR
SESVRLPDRSRHSNRDLARTWSQRDNPDKRVHFQDDTRNSNRQPDDSGQVWEMLGQVLRE
RGVPVTVGANGAPLQIGPQSRDSQVLHGSEVSCCSSQPHQRVFQRAATTRHSFHGDIRKR
RLSSHRENSGRDHREDPDGHCDNGERYGEVHEISSRESNLASGESRGSRRWSEHRNTNDD
ERGRNANDSRVKRTTSERRPWHKTTERRLSSEEVREVEGRAEWPPRRAPQRSLSLSSTGA
STMDRSRHEAAGVSLQPDPSETSLNLGELQQVLRDEELARKLQEEEDKPMRRNSQPPPRS
PYPQGDFRVAQVAQDEEIARFMQKQEIKSKRRSRELEGPASWREHRAMISHHDRRTARER
QVQRERLDSEGLPSPTEDCCPENQPPSPSSTLLPAQHIRNIAEELDPTFQARRQDTERHQ
VEQTGPACQSLPVPHSGLNAFLVEPAFIPPTKRQPEKSTHSKPKEKKENCKQQ
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgaggcttcccactcctcctcagcgtccatgacacctcccagtgcacctccc
agtgcacctcccagtgcacctcccagtgcacctcccagtgctcctcccgctatgtgccag
tgttttgccgttctggaggatggagcgatggcacacaacctgcaggagcaggagatcgag
cagtactacagcaccaacatccagaagaaccagctcgtgcagaatgacatccgcgtggcc
aagaggctgcaggacgaggaggacgatcagcgagcccagcagagcgccgacctcagacag
gcctccagacaactagaggagcaggacttggagtacgctcgtgtcattcaggaggagctc
cagcgctgtgctgaggaggcccacaggagagaacaggatgatgaggaaatagctaagcga
atgcaggaagaggaggagaagaggatcagggcgaggagcagagggcaggagggccacagt
gaagacagcgccggtgactctgctctgccggcctcacaccagcacacactcagcagccaa
cgaggggagcagtgctcatctaccaccacaaggtggcagtattctacctctcacaaccat
tcagacctaactggggctgtcccccccaggggaccagtagctcgggaaagcacaacttca
gggtcaaatcaaggatgcacagattccattaggccgatcagggaagagttgagtgaggac
tcagaggacacagacacagttttctctgcacagctctctgtctggtcccagagaccgaat
agaagactaaacacagcccctcctcaacgccgggccgcttcgcattatccacaagagaga
aactacagaagtcttaactcgcgcagcagcatcacagatgacttcagaggctggaacgag
gagagaggggaaggggatgaggattattatgacaatgaatgttatgacagagagaagaag
agacatgggaaccggcagcaggaaaggagccacagagaggagtatgagggatggcacagg
agcaaggatcaggagagagactccaggtcagtcgaggttagagaaaagcgatgcagccgc
agtgaatccgtcaggttacctgacaggagtagacacagcaacagagacttagcgaggacc
tggagccaaagggacaacccagacaaacgtgtccactttcaggacgacaccagaaactct
aacaggcagccggatgacagcggacaagtctgggagatgcttggccaggtcctcagggag
aggggtgtgcctgtgacggttggtgccaacggggcaccactgcaaatagggcctcaaagc
cgagacagccaggtgcttcatgggagcgaggtctcctgctgcagctcccaaccacatcag
agagtcttccagagagcggccaccaccaggcacagtttccatggagatatcaggaagagg
aggctatcgtcacaccgagagaacagtgggagagatcacagagaagacccagacgggcac
tgtgataatggggagcgttatggagaggttcatgagattagcagcagagagtccaatctt
gcgagcggggaaagtcgaggcagtagaaggtggagcgagcacagaaacactaatgacgac
gagagggggaggaatgcaaatgattccagggtcaagaggacaacgagtgaacgccggcct
tggcacaagaccacagaacgaaggttaagctcggaggaggtgcgggaggtggaagggagg
gcggagtggccccctcgacgagccccacagcgtagcctaagcctcagcagcaccggggcc
tccaccatggataggtcaaggcacgaggcagcaggtgtgtcactgcaaccagacccgagt
gagacaagcctgaaccttggggaattgcagcaggtcctgcgagatgaagaactcgcccgc
aagctgcaggaagaagaggacaagccgatgaggaggaactcccaaccccctccacgtagt
ccgtacccacagggagacttcagagtagcgcaagtggcgcaggacgaggaaatcgcacgt
tttatgcagaagcaggaaatcaagtcaaagcgtcgatcgcgcgagctcgaaggaccggcg
tcgtggcgtgagcacagagcgatgatcagtcaccatgatagacgaactgcaagagagaga
caggtccagcgagagagactggactcagagggacttccttcccccacggaggactgctgc
ccggagaaccagccgcccagtcccagctccactttactaccagcccagcacatcaggaac
atcgcagaggagctggacccgaccttccaggcccggaggcaagacacagagcgccaccaa
gtggaacaaactggtccagcgtgtcagtcacttcctgtgccgcattctggcttaaacgcc
ttcctcgtggagccggcgttcatcccgcccacaaagcggcagcccgaaaaatcgacgcac
tcgaaaccaaaagagaagaaggaaaactgcaagcagcaataa
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