Hippoglossus stenolepis (Pacific halibut): 118111209
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Entry
118111209 CDS
T08308
Symbol
nsun5
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase isoform X1
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hsp03009
]
118111209 (nsun5)
Enzymes [BR:
hsp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
118111209 (nsun5)
Ribosome biogenesis [BR:
hsp03009
]
Eukaryotic type
Other ribosome biogenesis factors
118111209 (nsun5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NSUN5_N
NSUN5_fdxn-like
Methyltr_RsmB-F
FtsJ
Methyltransf_31
RsmF-B_ferredox
K_channel_TID
Motif
Other DBs
NCBI-GeneID:
118111209
NCBI-ProteinID:
XP_047196324
LinkDB
All DBs
Position
6:17641174..17645591
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AA seq
622 aa
AA seq
DB search
MALYVKAADILEKAERKQGALKTLVYDSKFSNIKQLFALVCETQKFSSVLLELIESTKLL
KQTRLRPHLALVLVYDLLIGQGLKCGGSWKVMMMKHRSRLQAALARMKVKQKVSRNEDLL
PAGVQKAAGESLPRYVRVNTLKTTVEDVGVYLKRDGFTFQGNASRLEDLTLKENHFVRDM
HLPELLVLAPKTDFHDHFLYKGGHIILQDKASCLPAYLLNPPPGCHVIDACAAPGNKTSH
LAAIMKNKGKLFAFDMDAKRLATMSTLLLRAGVTCHQLAHQDFLKVDSDGAQYKDVEYIL
LDPSCSGSGMVCLRDSTSADKEKDQARLASLASFQLRCLNHALRFPRVKRLVYSTCSVHS
QENEDVIGACLQQNPGFRLVPLLAQWPERGLEPFTQCLRASIATTRTQGFFVAMLEKHSE
VANTKQEAVQISGPEATTTHSQHACEEKPEDPQSEDEQTPAADVMPCRQTDSTPGRKRKT
TTPEDPQSEDEQTPAADVMPCGQTDGTPGKKRKTTTTTPEDPQSEDEQTPAADVMPCGQT
DGTPGKKRKRKRKKKKKTTTTAAAAAAVPAAAVAVAERRRWQRRWQRRQCWQRCRRQSDK
KKRTCTLCCQERLFAKAYANFQ
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggctctgtacgtgaaagccgcagatatcctggagaaggcggagaggaagcagggcgct
ttgaagaccctggtgtacgacagtaagttctccaacatcaagcagctgttcgctctggtg
tgtgagacccagaagttctcctccgtcctgctggagctcatcgagtccaccaagctgctg
aagcagacccggctgaggccgcacctggccctggtgctggtgtacgacctgctgatcgga
cagggcctgaagtgcggaggctcctggaaggtgatgatgatgaagcaccgctccaggctg
caggcggcgctggcccgcatgaaggtgaagcagaaggtcagccggaatgaagacctgctc
ccggccggtgtccagaaggccgccggggagagcctgcccaggtatgtgcgtgtgaacacc
ctgaagaccaccgtggaggatgttggggtctacctgaagagggatggcttcaccttccag
gggaacgcctccaggctggaggacctcaccctgaaggagaatcactttgtgagggacatg
cacctgccagagctgctggtcctcgctcctaaaactgacttccatgaccacttcctgtac
aagggcgggcacatcatcctgcaggacaaagccagctgtctccccgcctatctcctcaac
cctccacctggctgccatgtcatagatgcctgtgctgcccccggcaacaagaccagccac
ctggccgccatcatgaagaacaagggcaagctgtttgcttttgatatggacgccaaacga
ctggccaccatgtcgactctcctgctccgagccggggtcacctgtcatcagctggcacac
caggacttcctgaaggtggactctgacggggcgcagtataaagatgtggagtacatcctg
ctggatccctcctgcagtggatcaggtatggtgtgcctccgggacagcacctctgccgac
aaggagaaggatcaggctcgtctggcctccttggcctctttccagctgcggtgcctgaac
cacgctctcaggttcccccgcgtgaagcgcctggtctactccacctgctccgtccacagc
caggagaatgaggacgtcataggagcctgtctgcagcagaaccccggcttcaggttggtt
cctcttctggctcagtggcctgaacgaggcctggagccatttactcagtgtctgcgcgcc
agcatcgccacgacccgcacacaaggctttttcgtggcgatgctggagaaacacagtgag
gtggcaaatacgaaacaggaagctgttcagatcagcggccctgaggcgacaactacacac
agtcaacatgcctgcgaggagaaacctgaagatccccagtcagaggacgaacagacacct
gcagcagacgtgatgccctgcagacaaactgacagtacaccaggcaggaagaggaagacg
acgacacctgaagatccccagtcagaggacgaacagacacctgcagcagacgtgatgccc
tgcggacaaactgacggtacaccaggcaagaagaggaagacaacgacgacgacacctgaa
gatccccagtcagaggacgaacagacacctgcagcagacgtgatgccctgcggacaaact
gacggtacaccaggcaagaagaggaagaggaagaggaagaagaagaagaagacgacgacg
acggccgcagctgcggcggcagtgccggcggcggcagtggcggtggcagaaaggcgccgg
tggcagcgccggtggcagcgccggcagtgctggcaacggtgccgccggcagagtgataag
aagaaaagaacttgcacattatgttgccaggagcgattgtttgcgaaggcctatgctaat
ttccaatag
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