Hippoglossus stenolepis (Pacific halibut): 118111230
Help
Entry
118111230 CDS
T08308
Symbol
apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsp03400
]
118111230 (apex2)
Enzymes [BR:
hsp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
118111230 (apex2)
DNA repair and recombination proteins [BR:
hsp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
118111230 (apex2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Amastin
Motif
Other DBs
NCBI-GeneID:
118111230
NCBI-ProteinID:
XP_047196067
LinkDB
All DBs
Position
6:complement(5480959..5485184)
Genome browser
AA seq
616 aa
AA seq
DB search
MSGKCDFRSYVPPDFRFTSAVAHHSQAAAVTFSKMKIVTWNINGIRTFRGGIKQALDSLD
ADIICVQETKVTRDLLDERSAIVDGYNSYFSYSRGRSGYSGVATYCKDSATPIAAEEGLT
GLLTSHEGAVGCYGDHAEFSTEELQLLDNEGRAIITQHRIMCQDKVQTVTVINVYCPRAD
PEKPERKLFKLQFYKLLQCRAEAVLKDGSHVIVLGDVNTSHRQIDHCDPCDIEDFGENPG
RKWLNGFLHGGKQEEDRNEEELDEESEVTPTDPVHGGKFVDTFRYFHPTRTNAFTCWSTL
TGARQTNYGTRIDYIFADCQLAKEQFATADIMPEVEGSDHCPVWGQLSCPLLPNSKPPPL
CTRYLPEFAGKQQKLSRFLVKVDPKSAQSEQRDVLPGSQEEGEKMENLNPLGAGNVSGKK
RGLTSDSVVPRGKKTKTVKTNSKPQGSLLSFFKPKPTNVVPPAEAPLRQCETPLSLDNTS
TQTSQKESTTRENVSSVTDRVPEDTDTVNNHSPQTCTSSTAEKCNKQVKTKHSTTQPTVG
HSGANKGASSVFWKSVLHGPPPPPSCKVHGEPCVLRTVKKEGPNMGKQFFVCARPQGHAS
NQEARCNFFAWVDKGK
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaaaatgtgacttccgctcgtacgttcccccagacttccggttcacttccgcg
gttgcacatcacagccaagcagctgcggtcactttttccaagatgaagatcgtcacctgg
aatataaacgggatccggactttcagaggcggaatcaaacaggctctggattctctggac
gcagatatcatctgtgtgcaggagaccaaagtgacaagagacctgctggacgagaggagc
gccatcgtggacggctacaactcatatttcagctacagtcgaggacgcagcggatattca
ggcgttgccacttattgtaaggacagtgccactcccatcgctgctgaggagggtctcact
ggtctgctcaccagccacgaaggggcagtgggatgctacggtgaccacgctgagttttca
accgaggagctgcagctgttggacaatgaaggacgagccatcatcacacagcaccgaatc
atgtgtcaggacaaagtgcaaactgttaccgtcatcaacgtgtactgtccacgggctgat
cctgaaaagccggagcgaaaactgttcaaactgcagttctacaagctgcttcagtgtcgg
gctgaagctgtactgaaagatggcagccacgtgattgttttaggagatgtaaatacatct
caccggcagatagaccactgtgatccctgcgatattgaggattttggtgaaaatcctggc
aggaaatggctgaatggtttcctgcacggtggcaaacaagaggaagacaggaacgaggag
gaactcgatgaagaatctgaggtaactccgacagatcccgtccacggagggaaatttgtg
gatacgtttcgctatttccacccaactcgaacaaacgccttcacgtgctggtccacactc
actggagcgcggcagacaaactatggcacccgcattgattatatattcgctgattgccag
ctcgccaaggagcagtttgcgacggcggacatcatgccagaggtggaggggtcagaccac
tgccctgtgtgggggcaactgagctgccctctcttgcccaactctaagcctcctcccctt
tgtactcgctacctgccagagtttgctggcaagcagcagaaactctcacgcttccttgtt
aaggttgatccaaagtcagctcagtctgagcagagggatgttttacctggatctcaggag
gagggagaaaagatggagaatttaaacccactgggagctggaaatgtctctggtaaaaag
cggggattaacatcagattctgttgtcccaagagggaaaaagacaaagacagtaaagact
aattcaaagccacaaggcagcctcctttcctttttcaaacctaaacccacaaatgttgtt
ccccctgctgaagcccctttgagacagtgtgaaacacctctcagcctggataacacctca
acacaaacctcacaaaaagagtccacaacgagagaaaatgtttcctcagtcacagacaga
gttcctgaagatacagatacggtgaataatcattccccacagacgtgcaccagcagcacc
gcagagaaatgtaacaaacaggtgaagacaaaacattcaaccacacaacccactgtggga
cactcgggtgccaacaaaggagcatcatctgtgttttggaagtcagttcttcacggacca
cctccaccgccctcctgtaaggtccacggggaaccctgtgtgctgcgtactgtaaagaag
gaggggccaaacatgggtaaacagttcttcgtgtgtgcacgtcctcagggccatgcctcc
aatcaggaggctcgatgtaatttctttgcgtgggttgacaagggaaagtaa
DBGET
integrated database retrieval system
