Hippoglossus stenolepis (Pacific halibut): 118111234
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Entry
118111234 CDS
T08308
Symbol
lima1a
Name
(RefSeq) LIM domain and actin-binding protein 1a
KO
K23026
LIM domain and actin-binding protein 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hsp04812
]
118111234 (lima1a)
Cytoskeleton proteins [BR:
hsp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
118111234 (lima1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
118111234
NCBI-ProteinID:
XP_035015553
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All DBs
Position
6:2247400..2265885
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AA seq
687 aa
AA seq
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MASVAPFSRRQWASQSLRVTAKEMSIVSARGKTNAIAERFSKYQMAAEEGNAEKKKTAAE
PLPSALRSGNLSVLKKRWEQQQPSSCHRAQTQEATPCGPADPQNPISQSTGPKASPRSLF
KSRSDTWGSSAVPQEQDTEPQPETGEDQLDLTDMEAPPSRTTDELEAAADVSECEKPSVP
LNSLKRMFETGEKPRDEESREQTGDNMEQILGDGSLADSTPLRDRMALYQAAISKQDVTS
EQLDGFCGKQKENVPPCSLDLSPESEANGRRVLTAESNGSGPGAPVSSNQKDSSQPKTPR
NFRLPVRETCVSCLKTVYPLERLVANQHVYHSSCFRCSHCNTQLSLANYASLHNNVYCKP
HFCQLFKAKGNYDEGFGHRPHKELWESKDDAGESPPPNSLKIQSSAPASDLDSPSVEDSP
LAKVNVLMATMEALGQGSAEKADRPTEGRRLKISWPPRTEPEEGGATTEGGSAGKPIRAK
WPPEDDSPSSPTEEARETSCLLNSSSLKERSLPFTLANSPDSRKQSSPPPPEELSPEPSG
MELQLGDGQSSHSQTPTDDNCVDIHTSSGEEEQEEQEGEMKSEEVAEHHVVQEEEEEDAL
GGRAEQQEEDEVDKMEEEEEDGGVLEEMPTEQVSSPEVEVEASKASQDVGFWDSEEVDDK
EEEEALTVEEMIKRNRFYEEEEEEEDV
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgtcgcccccttcagccgcaggcagtgggcgtcccagtcactgagggtcacc
gccaaggagatgtccatcgtctccgcccggggcaaaaccaacgccatcgcagagcgcttc
tccaagtatcagatggcagcggaggagggaaatgcagagaagaagaaaacggctgcagaa
cctctgccctcagcgttacgcagcgggaatctaagtgttttaaagaaacgctgggaacag
cagcagccgtcgtcctgtcaccgagcccaaactcaggaggccacaccctgcggccccgcc
gaccctcagaaccccatcagccaatcgacgggccccaaagcctcacccaggtcactgttc
aagagccgctcggacacctgggggagctccgctgtgccacaggagcaggacacggagcca
cagcctgagaccggtgaggatcagctggacctgacggacatggaggcgccgccgagcaga
acgaccgacgagctggaggctgcggccgacgtgtctgagtgtgagaagcccagcgtcccc
ctcaacagcctgaagaggatgttcgagacgggagagaagccgagagacgaggagtccagg
gaacagacgggcgataacatggagcagatactaggagatggaagtctcgctgactccact
cctctccgggacaggatggccctctaccaagctgccatctccaagcaggacgtcaccagc
gaacagctggacggtttctgtgggaagcagaaggagaacgtccctccgtgctctctggac
ctgagtccagagtccgaagcaaacggcagaagagttttaactgcagaaagcaacggttct
ggtcccggcgccccggtgtcgtccaatcagaaggactcgtctcagcccaagactcccaga
aacttccggctgccggtgagggagacctgcgtgtcctgtctgaagacggtgtatcctctg
gagaggctggtggccaatcagcacgtttaccacagctcctgcttccgctgctcgcactgc
aacacccagctcagtctggcgaactacgcctccctgcacaacaacgtgtactgcaagccg
cacttctgccagctcttcaaggccaagggcaactacgacgagggcttcggccaccggccc
cacaaagagctgtgggagagcaaagacgacgccggtgagtctccgccgccgaacagcctg
aagatccagagctcggccccggcctcggacctggacagccccagcgtggaggactccccg
ctggcgaaggtcaacgtcctgatggccacgatggaggcgctgggtcaggggtcggcagag
aaggccgacagacccaccgaggggcgccgactcaagatctcctggccgccacgcaccgag
ccggaggagggcggagccaccacagagggggggtctgctggtaaacccatcagagccaag
tggcccccggaggacgactccccctcctcacccaccgaagaggccagggagacgtcctgc
ctgctcaacagctcctccctgaaggagcgcagcctccccttcacgctggccaacagtcct
gactccaggaagcagagttcacctcctcctcctgaggagctcagccctgaaccctccggc
atggagctgcagctcggagacggccagtcgtcccacagccaaacgcccactgacgacaac
tgcgtcgacattcacaccagctcaggggaggaggagcaggaggagcaggagggagagatg
aagagcgaagaagtggcggagcatcatgtcgtccaggaggaggaagaggaggacgctctg
ggaggacgagctgagcaacaggaggaagacgaggtagataagatggaggaggaggaggaa
gatggaggcgtgttggaggagatgccgacagagcaggtctcgtctcctgaggtggaggtg
gaggccagcaaggcgtcccaggacgtggggttctgggacagcgaggaggtggatgataaa
gaggaggaggaggcgctgacggtggaggagatgatcaaacgtaaccgtttctacgaggag
gaagaggaggaagaggatgtgtga
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