Hippoglossus stenolepis (Pacific halibut): 118111311
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Entry
118111311 CDS
T08308
Name
(RefSeq) LOW QUALITY PROTEIN: fibromodulin
KO
K08121
fibromodulin
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
118111311
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
hsp00535
]
118111311
Proteoglycans [BR:
hsp00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
118111311
SSDB
Ortholog
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_6
LRR_5
LRR_9
LRRNT
LRR_14
TSCPD
SUVR5_N
Motif
Other DBs
NCBI-GeneID:
118111311
NCBI-ProteinID:
XP_035015655
LinkDB
All DBs
Position
6:complement(9046197..9048607)
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AA seq
346 aa
AA seq
DB search
MQRVVLLLLIGIVDLSMCHHNSQFQWLSHLRGQRRHASWQAGQVDCPLECDCPSTYFTAM
YCHNRNLQHVPYVPSHIKYVYLQHNRITGIQDGVFDNATNLVWVVLFNNQLNSDKIGNNV
FSKLKNLDRLLLDHNELTHVPPNLPKSITDLRLGHNKFSKILPKSFEGMANLTSLQLQAN
VIEDVXDAFKGLKSLTLLDMRKNKLRTIPDKLPERLQQLYLEFNSIESVPEGFLTMYPQL
QYVRLAHNKLTDKGLPSNVFNISTLTELDLSFNKLEKIPVVSRDLENLYLQANKIKEFSL
HSFCSAIDMANFSRLRVLRLDANKISARDIPAEAAYCLRRVAFVDV
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgcagagagtggtgctcctcctcctgatcggaatcgtggatctgagcatgtgccatcat
aacagccagttccaatggctgtcccatctgcgagggcagcgtcggcacgccagctggcag
gccggccaggtggactgccccctggagtgcgactgcccctcaacctatttcactgctatg
tactgtcacaaccgtaacctacagcatgttccctacgtaccctcacacataaagtatgtc
tacctgcagcacaaccggatcactggcatccaggatggggtgtttgacaacgctaccaac
ttggtctgggtcgtgctgtttaacaaccagctcaactcagacaagattggcaacaacgtc
ttcagcaagctcaagaacctggaccggttgctcctggatcacaatgagctcacccatgtg
cctcctaacttgcccaagtccatcacagacctgcggctcggtcataacaagttctcaaaa
atccttcccaaatcgtttgaggggatggccaacctcacctcccttcagctccaagcaaat
gtcatagaggacgtttgagatgcgttcaaggggctgaagtctctgactttgctggacatg
aggaaaaacaaactgaggacgatccctgacaaactccctgagaggctgcaacagctctac
ctagagtttaacagcatagagagtgtgcccgaaggcttcttgaccatgtatccccaactg
cagtatgtccggttggctcataacaagctgacagataaaggacttccatccaatgtcttc
aacatcagcacactgactgagctcgacctgtccttcaataaactggagaagatccctgtt
gtcagcagggatctagagaacctttatctgcaagccaataaaatcaaagagttctccctg
cacagcttctgcagtgcaatcgacatggcaaacttctccaggctgagagtgctacgcctg
gatgccaataagatcagtgccagagacattcctgctgaagctgcctactgtttgcggcgc
gtcgcctttgttgacgtgtag
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integrated database retrieval system
