Hippoglossus stenolepis (Pacific halibut): 118111375
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Entry
118111375 CDS
T08308
Symbol
rbm39b
Name
(RefSeq) RNA-binding protein 39b isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsp03041
]
118111375 (rbm39b)
Spliceosome [BR:
hsp03041
]
Common components
Common spliceosomal components
General mRNP proteins
118111375 (rbm39b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RRM_7
RRM_8
RSRP
Motif
Other DBs
NCBI-GeneID:
118111375
NCBI-ProteinID:
XP_035015800
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All DBs
Position
6:9120701..9130010
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AA seq
520 aa
AA seq
DB search
MADDFDVEAMLEAPYRKDEIKSSHANGHDDQNKKKRRSRSRSRSPGSKKRRSRSKDKKKG
KKRSRSRERKRSRSRERHRSGSRSKERSGRYRARKSPIRKRSKSRSPFKKEKSPISNTTS
KFDVAQMRDYQENQKTHRQPIDNLTPEERDARTVFCMQLAARIRARDLEDFFSAVGKVRD
VRMISDRNSRRSKGIAYIEFVDSSSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAAAANN
LQKGSSGPMRLYVGSLHFNITEEMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFADA
ECAKKALEQLNGFELAGRPMKVGHVTERSDSSTASSFLDNDELERTGIDLGTTGRLQLMA
RLAEGTGLKIPPAAQQALQMTGSIPFGNMSSQQSVPTPASNQALNLPSQPLATHCLQLSN
LFNPQAENDPTWATEIQDDVIEECNKHGGIVHIYVDKNSTQGNVYVKCPSIPAAMATVNA
LHGRWFAGKMITAAYVPLPTYHNLFPDSVTAKQLLMPTRR
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgattttgacgttgaggccatgctggaggctccatacagaaaggatgagatc
aagtcctctcatgcaaatggccatgatgaccagaataaaaagaaaaggaggagcagaagt
aggagccggagcccaggctctaagaaaagaagaagcagaagcaaagacaaaaagaagggt
aagaagaggagccggagccgagaaagaaaacgaagccgcagcagagagcgccatcgcagc
ggctcccggagcaaggaacgatctgggcgttacagagcacgaaagagccccattcgcaaa
cgttccaaaagtcggagccccttcaaaaaggaaaagagtcccatcagcaataccaccagc
aagtttgatgtagctcagatgcgtgattatcaagaaaatcaaaagactcacaggcaacca
attgacaatctaacacctgaggagcgggatgcacgcacagttttctgtatgcagctcgct
gccagaatcagagctcgggacctggaagactttttctcagctgtcggaaaagtcagagac
gtaagaatgatctcagacagaaactcaaggaggtcaaagggcatcgcatacatcgagttt
gtggactcctcttctgtgcctctggcgatcggactgaccggccagaggcttttaggagtt
cccatcatcgtccaggcctctcaggcagagaaaaacagagctgcagcggctgctaacaat
ttacagaagggcagttcaggtccgatgcggctgtacgtgggctcgctgcatttcaacatc
accgaagaaatgcttcgagggatctttgagccctttggaaagattgagggaatccagctc
atgatggacagtgagactggacgatccaaaggatatggcttcatatcgtttgcagatgca
gaatgtgcaaaaaaggccctggagcagctgaacggcttcgagctggccgggcgtccgatg
aaggtggggcatgtgacggagcgctcagactcctcgacggccagttccttcctggacaac
gacgaactggagaggaccggcatcgacctgggcaccaccgggcgtttacagctaatggct
cgactagcagaaggaactggtctgaagatcccccctgctgctcagcaggccctgcagatg
actgggtccataccgtttggaaacatgtcttctcaacaatctgtcccaactccagcttca
aaccaagccttgaacctcccatcacagccgctggccacacactgcctccagctgtccaac
ctgttcaacccacaagcggaaaacgatcccacctgggccactgagatccaagacgatgtg
atcgaggagtgcaacaaacacggaggaatagttcacatttatgtggataagaactcaact
caaggtaatgtgtatgtgaagtgtccctcgataccagcagcgatggcaactgtaaatgca
cttcatggacgctggtttgcaggcaaaatgataacagctgcctacgttcccttacccacc
taccacaaccttttccctgattccgtaacggcgaagcagcttcttatgccgacacgtcga
tag
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