Hippoglossus stenolepis (Pacific halibut): 118111386
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Entry
118111386 CDS
T08308
Name
(RefSeq) general transcription factor IIF subunit 2 isoform X1
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118111386
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsp03021
]
118111386
Transcription machinery [BR:
hsp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
118111386
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
LYRM_2
Motif
Other DBs
NCBI-GeneID:
118111386
NCBI-ProteinID:
XP_035015838
LinkDB
All DBs
Position
1:complement(9059548..9065302)
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AA seq
268 aa
AA seq
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MSEKGEVDLTGAKQNTGVWLVKVPKYLSQQWAKASGRGDVGKLRISKKGNQGKAEVSFTL
NEELTVIEGIEAKTASVPREHPFTMQSVGGQLLAVYSENPAGQSEERSDGSSSGAGAGPD
KIALEGVVVQRAECRPSVSESYMRLKRIQIEESSKPTRLSQQLDKAVTSNYKPVANHAYN
LEYDRKKKEEGKRARADKQQVLDMLFSAFEKHQFYNIKDLVDITKQPVSYLKEILRDIGN
YNVKGTHKNTWELKPEYRHYHGDEKTDE
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaaagggagaagtggatttaactggagccaaacagaacacgggtgtttggctt
gtgaaggtgcccaaatacctctctcagcaatgggcaaaagcttctggcagaggcgacgtt
gggaaactccgcatctccaagaaaggaaaccaaggaaaagcagaggtgagttttactctg
aatgaagagctgacggtgatcgagggtatagaagccaagacggcgtctgtgccccgcgag
cacccgttcaccatgcagtcagtgggaggtcaattgctggcggtctactctgagaatccg
gcaggccagtcagaagagagatctgatggcagcagctcaggggcgggggcaggtccagat
aaaatagccttggagggagtggtagtgcagagagccgagtgccgaccttctgttagtgag
agttacatgaggctgaagaggatacaaatagaagagtcctctaagccaaccaggctgtcg
caacagttggacaaggccgtcaccagcaactacaaacctgtggccaaccatgcttacaat
ctcgagtatgaccggaaaaagaaggaagagggcaagagagcaagagccgacaaacagcag
gtgttggacatgttgttttctgcttttgagaagcaccagttctacaacatcaaggacctg
gtggatatcaccaaacagcctgtgagctacttgaaggaaatcttacgagatatcggcaac
tacaacgtgaagggaacacacaagaacacgtgggagctcaagcctgagtaccgacattac
cacggtgatgaaaagactgatgaatag
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