Hippoglossus stenolepis (Pacific halibut): 118111450
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Entry
118111450 CDS
T08308
Symbol
dhx35
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsp03041
]
118111450 (dhx35)
Enzymes [BR:
hsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
118111450 (dhx35)
Spliceosome [BR:
hsp03041
]
Complex C
Other components
Complex C specific factors
118111450 (dhx35)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
ABC_tran
AAA_19
Cas3-like_C_2
nSTAND3
ResIII
AAA_30
Flavi_DEAD
AAA_7
AAA_23
Motif
Other DBs
NCBI-GeneID:
118111450
NCBI-ProteinID:
XP_035015955
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Position
6:complement(10507133..10516131)
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AA seq
699 aa
AA seq
DB search
MAAPLSTMKFWKPGAEAPGISEERELNTETSGSPVIFNPHTALSIEKQRQKLPVFKHRNN
ILYLVESFQTVIIVGETGCGKTTQIPQYLLEAGWAAEGKVIGVTQPRRVAAISVANRVAE
ERGALLGHEVGYTIRFDDCSDPQATRIKFLTDGMLVREMMADPLLKKYSVMILDEAHERT
LYTDIAIGLLKKIQRKRRDLRLIVASATLDAKKFHDFFNLNESGDPNKDTCGILTVEGRT
FPVDVFYTVSPVPDYVKATVETVLKIHETEDDGDVLAFLTGQEEVEKVVSLLQEQARSLS
RYGMKKHLRISPMYSGLPYAEQMKVFERAPSSVRKVVVATNIAETSITINGVVFVIDCAF
VKLRAYSPSTGIESLVVTPISKASASQRAGRAGRNRPGKCFRLYTEEDFEKLPASTVPEM
QRTNLAPVILQLKALGIDNVLRFSFLSPPPAQTMVQALELLYALAGLDHYGRLTDPTGLR
MAEFPLSPMFAKMLLESGNFGCSKEIVTIAAMMQIQNIFVTAPNQKKAAAREHRKFAVAE
GDHLTMLNVYEAFIKHQKSSQWCQEHFLNYKGLLRAVTVREQLRRLMNKFKVPRTSSEGD
PDVILKCIVSGFFANAARIHHSGSYRTLRDDRELQIHPSSVLFGEKPPKWVVFNEVVQTS
KYYMRDVTAVESTWLVELAPHFYKQAKHGSLASKRSRVL
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcccctttccacgatgaaattttggaagccgggcgccgaggctccggggatc
tcagaggagcgggagctcaacacggagaccagcggctcgcccgtcatcttcaacccgcac
accgcgctctccatcgagaagcagcggcagaagctccccgttttcaagcacagaaacaac
atcttgtacttggtggaaagctttcagacggtcatcatagtcggagagacgggatgtggg
aagacaacacagatacctcagtacctgctggaagctggctgggcggcggaggggaaggtg
atcggagtgacacagccccgacgcgtggctgctatctctgttgctaaccgtgttgcagag
gagaggggggccctgctggggcacgaggtgggctacaccatccgatttgacgactgctct
gatcctcaagccacaaggatcaagttccttacagatggaatgctggtgcgggagatgatg
gctgatcctctcttgaaaaaatacagtgtgatgattctagatgaagcgcacgaacgaacc
ctgtacacagacatagcgattgggctgctgaagaagattcagaggaagcggcgagacctg
cggctgattgtggcctctgccactctggatgccaagaaattccatgacttcttcaacctc
aatgagtctggggatcccaacaaggacacgtgtggcattctgacagtagaaggacgcacg
tttccagtggacgtcttctacactgtcagtcctgtgccagactatgtgaaggccacagtg
gagacggtgctgaagatccatgagacggaggatgacggagatgtcctggcttttcttacc
ggtcaggaagaggtggagaaagtggtgtccctcctgcaggagcaggcgaggtctctgtca
cgatatggcatgaagaaacacctgagaatttcacccatgtactctggtctgccatatgct
gagcagatgaaagtctttgagagggcaccttcctctgttcgcaaggttgtggtggctacc
aacatagctgagacctccatcactataaatggcgttgtgttcgtcatcgactgtgccttt
gtgaagcttcgcgcctacagtccctccactggcatcgagtcgctggtggtcacccccatc
tccaaagcctcagcgagtcagagggccgggagagccggacgaaaccgacctgggaaatgc
tttagactttacacggaggaggactttgagaaactgcctgcctcgactgtgccagagatg
cagcgcaccaatttggcccctgtcatcctgcagctcaaagcattaggcatcgacaatgtg
ctgcgcttcagcttcctatctcctcctcctgctcagaccatggttcaggctctggagctg
ctctacgctctggcaggtctggaccattacggccgtttgacggatcccacgggtttgcgg
atggcggagtttcccctcagccccatgttcgcgaagatgctcctcgagtcaggaaacttc
ggctgctccaaggagattgttaccatagctgcgatgatgcagatccagaatatatttgtg
actgcgcccaatcagaagaaagctgccgcccgagagcacaggaaatttgcagttgctgag
ggagaccacctcaccatgctgaatgtgtacgaagcgttcattaagcaccagaagagctcc
cagtggtgtcaggaacattttctcaactacaagggtctgctgcgggctgtgaccgtacga
gagcagctccggcgtctcatgaacaagtttaaggtgccgcggacttccagtgaaggagat
cctgatgtgatcctgaagtgcattgtgtctgggttttttgctaatgcagcccgcattcac
cattctggctcctacaggactttacgagacgaccgtgagcttcaaattcaccccagctct
gtgctattcggggagaaacctccaaaatgggttgtcttcaatgaagtggtgcagacatca
aaatactacatgcgcgatgtgactgctgttgagtctacctggttggttgagttggcccct
cacttttacaagcaggccaagcatggttcactggccagcaagagatcccgggtcctgtaa
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