Hippoglossus stenolepis (Pacific halibut): 118111498
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Entry
118111498 CDS
T08308
Symbol
rtel1
Name
(RefSeq) regulator of telomere elongation helicase 1 isoform X1
KO
K11136
regulator of telomere elongation helicase 1 [EC:
5.6.2.3
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hsp03032
]
118111498 (rtel1)
Enzymes [BR:
hsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
118111498 (rtel1)
DNA replication proteins [BR:
hsp03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
118111498 (rtel1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
ARCH_RTEL1
HHD_RTEL1
ResIII
DEAD
Dmrt1
Motif
Other DBs
NCBI-GeneID:
118111498
NCBI-ProteinID:
XP_047196385
LinkDB
All DBs
Position
6:complement(26822208..26846756)
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AA seq
1152 aa
AA seq
DB search
MPTLTVNGVTVNFPFPPYECQKVYMNKVIECLQTKENGALESPTGTGKTLCLLCATLAWR
EHFKDTISARKIAQKMDGEMFPNTPLASWGSAATDGDTPTYYTDVPKIIYASRTHSQLAQ
VMNELKNTSYRPKVCVLGSREQLCINQEVMRQESNHVKVHMCRGKVSTRSCVYYNNVDEK
STDRDLVNSILDVEDLVKFGNKQRACPYYLSRSLKQQADIIFMPYNYLLDPKSRRAHNIE
LNGAVVIFDEAHNVEKTCEESTSFDLTPYDVASAINAVDRLLVEQAKEASHTDAVTENFN
VESLNSGLKIDLVTVAKIKQILLDLEAAIDSYDVPSDKGITKPGIFIYELLERAHLTYSS
KTAVHEALEQISGYLAGQTGIFLNTNGLQKLADIIQLVFCGEPSEKDRQQQMQLNTSHFK
VHIHRDTSSHKKKQSSDVWASSSSKKQGNILSYWCFSPGYSMQDLVNQGVRCIILTSGTL
SPLSSFTSEMRIKFPVCLENGHVIERDQIFVSVIERGPDGVQLSSAFDRRFVPENMASLG
KTVANMSRVVPHGLLVFFPSFSLMDKTLDFWRDNGHADRIESIKPMFVEPKGKGTFTEAI
DGYYNKVRDPASKGGSFFAVCRGKASEGLDFTDNFGRGVIITGLPFPPRMDPRVILKMQF
LDEMSRKRVPGLKYLSGQEWYRQQAFRAVNQAVGRVIRHKDDYGAIFLCDHRFKSSEARA
QLPSWVRPYVRLYDGFGNVVRDVSQFFRVAQKMRPVVEKTAAGKCSTECLSDTQSSGFTS
CASTQSSHTQKAKMLDSHLPSLKRRRLNENTGASGMAKICIEYECEVQESQRRPANLLDA
LERGDVHDGEGADAAVGEEKANHLSTLSLKHDKRMEDEMRGGKRKIKLVQEQKISVSEDV
CGESRASRAKTFLAEMKKSLSQVNFDRIVQALQTYKKTDNLDVLLTETAVLTEDTNTHSL
LRGFYQFVRPHHKKRFDERCVELTGQGCGYKPDHSLSKDEKKVLILQSATDREPAVSLTS
SSGTSTCRQLNTEQLNKGGHHLNQQGLREPATDKLQPPFLCSSASAPKKDVHVAFLADVK
KALGAEKSAELFKTINSYKKTDNYEQLVTTVVSLFTERDEDFNLLVRFGMFIRTHHKKQY
KEMVDALKGQPV
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgccgacactgactgtgaatggagtcacagtgaatttccccttccctccatacgagtgt
cagaaggtctacatgaacaaagtgattgaatgtcttcagacgaaagagaacggggctctg
gagagtcccacgggcactggtaaaaccttgtgtctgctgtgtgccaccttggcctggagg
gagcacttcaaggacaccatctctgcccgcaagatagcacagaagatggacggggagatg
ttcccaaacacaccgctcgcatcctggggatcggctgccacagacggtgacacaccaacc
tactacactgacgtccccaagatcatttacgcatccaggacacattctcagctggcacag
gtcatgaatgagttaaagaacacttcatacaggccaaaggtgtgtgtgctggggtcaaga
gagcagctatgtattaaccaggaagtgatgcgtcaagagagcaaccatgttaaggtccat
atgtgcagaggaaaagtctccaccaggtcatgtgtctactacaataatgttgatgagaag
agcactgacagagacttggtgaactctatccttgatgtggaagacttggtcaaatttggc
aacaaacagagggcctgtccttactatctctcacgttccttaaagcagcaagcagatatc
atttttatgccttacaattacctgctggatccaaagagccgtagagcccacaatattgag
ctgaatggagctgtggtcatttttgatgaagctcataatgtggagaaaacatgcgaagag
tccacgtcatttgacctgactccctatgatgtagcctctgccattaatgctgtggacagg
ctgctggtggagcaggctaaagaagccagccacacagatgctgtcactgaaaacttcaat
gtagaatccctcaactcaggtttaaaaatagatttggtcaccgttgctaaaatcaaacag
attctattggatctggaagctgccattgattcctatgatgttccaagtgacaaaggcatc
actaaacctggaatcttcatctatgagctgttagagagagctcacctgacctacagcagc
aagacagcagtccatgaagctctggagcagatcagtggatacttagctgggcagacagga
atattcttgaacaccaatggactgcagaagctggctgatatcatacagctggtgttctgt
ggtgagccatcagaaaaggacagacagcagcagatgcagttgaacacctctcattttaag
gttcatattcacagagacaccagctctcacaagaaaaaacagagctctgatgtgtgggcg
tcatcctcatcgaagaaacaaggcaatattctgagttactggtgcttctctcctggctac
agcatgcaggatctggtgaatcaaggtgttcgctgcatcattctgaccagtggtaccctc
tctcctctgtcatcattcacctctgagatgaggataaaattcccagtgtgtctggagaac
ggccatgtgattgagcgggaccagatctttgttagcgtcattgaacgaggcccagatggc
gtgcaattgagttcagcgtttgacagaaggtttgttcctgaaaacatggcatctttaggc
aaaactgttgccaacatgagccgtgtggttcctcatggtctcttagtgttctttccctcc
ttctctttaatggacaaaacactggacttctggagagataacggacatgcagatcgtatt
gagagcataaagcctatgtttgttgaacctaaaggaaagggcacctttactgaggctatt
gatggatattacaacaaagtccgtgatccagcatccaaagggggaagcttctttgcggtg
tgtcgagggaaggctagcgaaggtctggattttacagacaactttggtcgaggtgtcatc
atcacaggccttcccttccctccaaggatggaccctcgagtcatcttgaagatgcagttc
ttggatgagatgagccggaagagagttcctggactaaagtacctgtctgggcaggagtgg
tacagacagcaggctttcagagctgtgaaccaggccgtgggtagagttattcgccataag
gacgactatggagccatattcctgtgcgatcacaggtttaaaagctctgaagcccgggct
cagcttccatcatgggttagaccttatgtgcgtctgtacgatggctttgggaatgtggtc
cgtgacgtctctcaattcttcagggttgcacagaaaatgaggcctgtagtagaaaagact
gctgcagggaaatgtagcacagagtgcctatcagacactcagtcctctggcttcacttcc
tgcgcatccacccaaagctcccacacacagaaggctaagatgttggacagccaccttccc
agcctgaagaggaggaggctcaatgaaaacactggagctagtgggatggccaaaatctgt
attgagtacgagtgtgaggtgcaggagagtcagaggagaccagccaacctgttggacgct
ctggaacgaggtgacgtccacgatggagagggcgctgatgctgccgtgggagaggagaag
gcaaaccatctgtccaccctctctcttaaacatgacaagaggatggaagatgaaatgcgg
ggaggaaaacgtaaaatcaaattggtccaagagcagaaaatcagcgtgtcagaggatgtg
tgtggggaaagtagagccagccgagctaagacgtttctggcagagatgaagaagtcactg
agccaggtcaacttcgatcgcatcgtgcaggcgctgcagacctacaagaagacagacaac
ctggatgtcctgctcactgagacagctgtcttaactgaggacaccaacactcacagtctg
ctccgtggcttctaccagtttgttcggccacatcacaagaagaggttcgatgagaggtgt
gtggagctgacagggcagggctgcggatacaaaccggaccactcactgtcaaaggatgag
aagaaggtgctgatactgcagagtgccacagaccgtgagcctgctgtgagtctaacctcc
tccagtgggacgtctacctgcaggcagcttaatacagagcagctcaacaaagggggacat
cacttaaaccagcaaggattaagagaacctgcgactgataagctccagccccctttcctg
tgttcatcagcttctgctccaaagaaagacgtccacgttgcttttctggctgatgtgaaa
aaagccctgggagcagagaaatcagctgagctctttaagaccattaacagctacaagaag
acggacaattatgagcagttggtgaccacagtggtgagcttatttacagagagagacgag
gacttcaaccttctagtccgatttggcatgtttattcgcacccaccataagaagcagtac
aaagagatggtggatgctttgaaaggtcagccagtgtga
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