Hippoglossus stenolepis (Pacific halibut): 118111538
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Entry
118111538 CDS
T08308
Symbol
rprd1b
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1B
KO
K15559
regulator of Ty1 transposition protein 103
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsp03021
]
118111538 (rprd1b)
Transcription machinery [BR:
hsp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
118111538 (rprd1b)
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Gene cluster
GFIT
Motif
Pfam:
CREPT
CID
CTK3
Phage_GPO
DUF5076
pre-PUA_NIP7
Motif
Other DBs
NCBI-GeneID:
118111538
NCBI-ProteinID:
XP_035016095
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All DBs
Position
6:17308701..17315127
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AA seq
329 aa
AA seq
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MSSFSESALEKKLTELSSSQQSVQTLSLWIIHHRKHSALIVKVWHRELKKAKSSRKLTFL
YLANDVIQNSKKKGPEFAKDYETVLVDACSHVASEADVGCKKHMERLLNIWKERALYRAD
FIQQLKLAIEDSNSPRPSEEQKKPVKRSYQKIHEEEDDEDDDYRSHNSPRSTDASATLLT
EELVKALQDLENAASGDAAVRQKIASLPQEVQDVSLLEKITDKEAADKLSKTVDEACLLL
AEYNGRLAAELEDRRQLARMLAEYIGSQKEALMEREKKLEEYKQKLARVTQVRKELKSHI
QSLPDLSLLPNVTGGLAPLPSAGDLFSTD
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccttctccgagtcggccctggagaagaagctgacggagctgagcagctcgcag
cagagcgtccagactctgtctctgtggatcatccaccaccgcaaacactcagccctcatc
gtcaaagtgtggcacagagagctgaagaaagctaaaagttccaggaagctgactttcctg
tatctggccaacgatgtcatccagaacagcaagaaaaaaggaccagaattcgccaaagac
tatgagaccgtcctcgtcgatgcctgctcccatgttgccagtgaagcagatgtcggctgt
aaaaagcacatggagcgactgctgaatatctggaaggagagagccctgtacagagccgac
ttcattcagcagctcaaactggccatagaagactcaaacagccccaggccttcagaggag
cagaagaagcctgtgaaaagaagctaccaaaagatccatgaagaagaagatgacgaggat
gacgactacagaagccacaactctcccagaagcacagatgcctccgcaactctgctgaca
gaggagctggtgaaggccctgcaggacttagagaatgctgcatcaggcgacgcagctgtt
cgtcagaagatcgcctcgctgccacaggaagtccaggatgtttcactgctggagaagatc
actgacaaggaggcagcagacaagctgtcgaagacggtggacgaagcctgtttgctactg
gctgagtacaacggccgactggctgcagagctagaggaccgcaggcagctggcacgcatg
ctggccgaatacatcggcagccagaaggaggcgctcatggagagagagaagaaactagag
gaatacaagcagaaactggcgagagtgacccaggtgaggaaagagcttaagtcccacatc
cagagtctccccgacctctctctcctgcccaatgtgactgggggtctggccccgctcccc
tcggctggagacctcttctccaccgactga
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