Hippoglossus stenolepis (Pacific halibut): 118111554
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Entry
118111554 CDS
T08308
Symbol
scml2
Name
(RefSeq) polycomb protein SCMH1 isoform X1
KO
K11465
sex comb on midleg-like protein 2
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
118111554 (scml2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsp03036
]
118111554 (scml2)
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
PRC1.4 specific proteins
118111554 (scml2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
SLED
RBR
SAM_1
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
118111554
NCBI-ProteinID:
XP_035016124
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Position
1:8507607..8530365
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AA seq
683 aa
AA seq
DB search
MGRTPHRDQKEEKKERRSSITAGSALDKSNEPFSWEDYLRQTSSVAASPTCFKQSRLPPS
NDFKAGMKLEARDPRNSNSVCIATVMGMMGTRLRLRLDGSDNTNDFWRLIDSSDIQPIGT
CERNGDMLQPPLGFRMNASSWPMFLLRTLSGAEMAPASAFKKDPASPVKNYFQPGMKLEA
VDRKNPYLICPATVGEVRGQEIFVMFDGWRGAFDYWCPFDSRDIFPVGWCSLTKHSLQPP
GNFFTLPGALLAPVSSTSASLTTRRSSSTSSSSMQTSYRLPNPLPPLPVRKGVRGRRPKS
QTIALLKAAAEAAAAAAAVNGAPQSPARTETQLAPRPHKKRGPKPRNKKKPRVVQSLGSS
SVTAPPPETRLSSSHVSADNNNHSNSSNVVCTVCVYVNKHGDYGPNLDRKLVQQLPDHFG
PAPVNAVLQQAVQACVDCTYQPSVLLSFLQSQSHTGGEVIRVRSEHGIRYVKLPSVSSAS
SVLRFLENMCQHLESDSLFSSQPFSPFNNNTRFYNKTKSEPASHAENGLRKDDTTNDPIP
SPRSIHAASDYRATKKERPYYPGHTHTPPPLRRVSSNPAELDPMCAHRRVEASSTTGPDH
LKQDKEGSGNNASSWSVDDVIRFVQEADPQTLGPHVELFRKHEIDGKALMLLRSDVIMKY
MGLKLGPALKLCHHIEKLKQTKQ
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgggccgaactccacacagagatcaaaaagaggagaagaaggagaggagaagcagcatc
acagcaggctctgccctcgacaaatccaacgaaccgttcagctgggaagattatctgaga
caaacgtcctccgttgcagcttcgcctacatgcttcaaacagtccagactccccccctcc
aacgacttcaaagcaggtatgaaactcgaggcgcgggaccctcgcaactccaactcggtg
tgcatcgcgacggtgatgggcatgatgggtactcgtctacgtctgcggctggacggcagc
gacaacaccaatgacttctggcggctgatcgactcctcggacatccaaccaataggaacc
tgcgagaggaacggagacatgctgcagcccccgctgggtttcaggatgaacgcctcctcg
tggcccatgttcctgctgcggacgctgagcggagcggagatggcccctgcctctgctttt
aagaaggatccagccagccctgttaaaaactacttccagcctggtatgaagctggaggcg
gtggacaggaagaacccctacttgatttgtcctgccacagtgggagaggtcaggggtcag
gagattttcgtcatgtttgacggctggcgaggcgccttcgactactggtgccccttcgac
tccagagacatcttccccgtcggctggtgttctctgacgaagcacagcctacagccgccc
ggaaacttctttaccctccctggtgcactccttgcccctgtttcttccacctctgcctcc
ctcacgacacgtcgctcctcgtctacctcctcctcctccatgcagacctcgtaccgactg
cccaaccccttgccacccctcccagttcgaaagggtgtccgaggtcgccgtcccaaatcc
cagactattgctttgttgaaggcagcggccgaggcggcggcggcagcggcagcagtaaat
ggggcaccgcagagccctgccaggactgagactcaactggcccccagaccacacaagaag
agagggcccaagcccaggaacaagaagaagcctcgggtggtgcaatccctggggtcatca
tcagtcacagctccgcctccagagaccaggctgagctccagccacgtctcagccgacaac
aacaaccatagcaacagctcaaatgtagtttgcacagtttgtgtctacgtgaacaagcac
ggtgactacggcccgaacctcgaccgaaaactcgtgcagcagctgccggatcacttcggc
ccggctccagtcaatgccgtgcttcagcaagcggttcaggcctgcgtggactgtacgtac
cagccgtcagtgctgctgtccttcctgcagagccagtcccacacgggaggagaggtcatc
agagtgcggtcagagcatggtatccgctacgtgaagctgccctccgtctccagtgcatcg
tcggtgctgcgcttcctggagaacatgtgccaacatctggagagcgacagtctcttcagc
tcgcagccgttcagccccttcaacaacaacacacgcttctacaacaagaccaaatcagaa
ccggcttcccacgctgaaaacggcctgcgcaaagatgacacgacgaatgatcccatcccc
agcccccgctccattcacgccgcatcggactacagagcaaccaagaaggagcggccatat
taccctggacacacccacacaccgccgccactccgacgcgtcagctccaacccggctgag
cttgatccgatgtgtgcacacagacgagtggaggcgagctcaacaacaggaccggaccac
ttgaaacaggacaaggaaggttcagggaacaacgcctcttcctggtctgttgatgatgtc
atacggtttgtccaagaggcggatccccaaactctgggcccacacgtcgaactgtttagg
aaacatgagattgatggcaaggctctgatgctgctgcgcagtgatgtcatcatgaagtac
atgggactgaagcttggcccggcgctcaaactctgtcaccacatcgagaagctgaaacag
accaagcaatag
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