Hippoglossus stenolepis (Pacific halibut): 118111584
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Entry
118111584 CDS
T08308
Name
(RefSeq) neural cell adhesion molecule L1.1 isoform X2
KO
K06550
L1 cell adhesion molecule
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
118111584
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hsp04515
]
118111584
04090 CD molecules [BR:
hsp04090
]
118111584
04091 Lectins [BR:
hsp04091
]
118111584
Cell adhesion molecules [BR:
hsp04515
]
Immunoglobulin superfamily
L1 family
118111584
CD molecules [BR:
hsp04090
]
Proteins
118111584
Lectins [BR:
hsp04091
]
I-type lectins (Siglecs)
118111584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
ig
Ig_2
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
C2-set_3
C2-set_2
Tissue_fac
Motif
Other DBs
NCBI-GeneID:
118111584
NCBI-ProteinID:
XP_035016178
LinkDB
All DBs
Position
6:complement(1044255..1081248)
Genome browser
AA seq
1287 aa
AA seq
DB search
MCVSQRRWMGCKGPCPPPPLILLLPLAFLSLTPPFAQGAINIPKDYKVHNMSQPPVLTEM
PISYTAFSTEDINLPCEASGLPAPSFRWVKDGEEFGLEKKGSGTLWAEWETDLAFYEGFY
RCYASNTLGTAVTQTVQVIVEAQPVLLKQQKVHKRAYEGESIVLSCNPPESTTPPHIHWM
DKRMVHIKQSDRVMLGLDGNLYFANLLKSDSRDDYICNAQYSAARTILPETSVNLTVMPS
NDVAHGRKPQLFRPLDSHSTVNALRDHSVTLECIPKGLPTPHVEWKKKDGSLDETSGVVE
NSDRWLTFNSITQTDDGEYECRAFNIHGSTAHSFTVTVEAAPHWVKEPQSLLYAPGETVR
LDCQAEGIPTPTITWSINGQQITDVDYESRRAVSGGSLILKEVQFADTAVYQCEASNKHG
TILLNTYIYVIELPPQILSSDGVVYRVADGKDVKMHCSSFGSPRPHVTWESEDTLPPLSD
PRVALLTNGTMELSGVSHDDSGTYTCSVQHTNISITAHLEVFNRTMILTSPQDVHVLRGA
SALLDCRFYRDPRLLNYQIVWKRDGQKLLETSESDKYIFFNNGTLKVTDVQSVDTAQYSC
EVITDLDNVQANGSITVVARPDPPKDLSLSNLEDHSLTLSWIPGHSHNSPITEYVVEARE
EQHTEEGKWKWEQWQELPADFNHLQLNLHPHCIYRFRVIAINAIGRSHPSKASESHDTPP
AVPGSNPTGVRSDSTDPKTLIITWDEMDKRLHYGPDFQYKVSWRQAGGKSVHWNHSYSKS
PPFSVNDTGTYAPFEIKVQAVNSLGEGPAPEAEIGHSGEDVPEEAPTGVESTVMNSTVRV
KWSEAQGVRGLLLGYKIYIRRLGAQVGRGRRSLGKLHHGDERGERSDRGTDRDTASRVEV
VHGMKTSKEVTGLQLFSSYELSVTAFNGKGEGPHSLPHRFSTPEGAPGPPASLRSESPTE
KSLILYWTPPVETNGILLGYMVQYQQEVESKDSLLQMEFISDPNVTHIALDHLDPSSQYT
FKVIARTATGDGPPVTLSGATLLDGVPPTNVTVVQDNTSFNLSWTPGERDRNHGFHIHYL
RKSAGGEWEESELVNSTQGFYSLTGLQPGTEYHLMIRHGNVTQWHEELWTIGPEPSEMPA
GFATQGWLIGLVSAILLLILILLILCLIKRSRGGKYAVKDKEDKEVDSEARPMKDETFGE
YSDGDEKRSDSQPSLAGDSKLGSEDSLAEYGDSVDIQFNEDGSFIGQYSGRGPVPPGNES
SGPASPVTAAPPPPIAPSMSSILNRPS
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtgtcacagcgtcgctggatgggctgtaagggcccgtgtcccccgcctcccctg
atcctcctcctccctctggccttcctctccctcacgcctcccttcgctcaaggagccata
aacatccccaaagactataaagtgcataacatgtctcagcctccagtgttgacagagatg
ccgatatcgtacacagcgttttctacagaggacataaatctgccctgtgaggcctctggt
ctcccagcacccagtttccggtgggtgaaagacggtgaggagtttgggttggagaaaaaa
ggatcagggacgttgtgggccgagtgggagacggacctcgccttctacgaaggtttctac
cgctgctacgcttccaacacgctggggacggctgtgacacaaactgtacaagtcatcgtg
gaggctcaaccggttcttctcaaacaacagaaagtacacaagcgggcgtacgagggagag
agcatcgttctgtcctgcaacccccccgagagcacgactcctccacacatccactggatg
gacaagaggatggtgcacatcaagcagagcgacagagtgatgctcggcctcgacgggaac
ttgtattttgcaaatcttttaaagagcgacagcagagacgactacatctgcaacgcacag
tattcagcagccaggaccatcctcccagagacgtctgtgaatcttaccgtcatgcccagt
aatgacgtcgcccacggtagaaagcctcaactgtttcgacccctcgactcccacagcacg
gtgaacgccctccgagatcacagcgtcacactagagtgcatccccaaaggcctacccact
ccacatgtggaatggaagaagaaggacggcagcctggacgagaccagcggcgtcgtggag
aactccgaccgctggctcaccttcaacagcatcacgcaaaccgacgacggagaatacgag
tgtcgggccttcaacatccacggctccaccgcacactcgttcaccgtcactgtggaagcg
gctcctcattgggtgaaggagcctcagagcctgttgtacgctccgggggaaactgtgcga
ctggattgtcaggctgaaggaatcccgaccccgactatcacctggagcatcaacggtcag
cagatcacagacgtggactatgaatcccgtcgggccgtgtccggcggcagtttgattctg
aaggaagtacagtttgctgacaccgccgtgtatcagtgcgaggcctccaacaaacatggc
accatcctcctcaacacctacatctacgtcattgagctgcctcctcagatcctgtcgtct
gacggagtcgtgtacagagtcgctgacggcaaagacgtcaagatgcactgctcctccttc
gggtctccacgaccacacgtcacatgggagagtgaagacacacttcctccgctgtcggac
cctcgggtcgccctgctgaccaacggcaccatggagctgtcgggcgtcagtcacgacgac
agtggaacgtacacgtgctccgtccaacacaccaacatctccatcactgcacatctggaa
gttttcaatcgcacgatgattctgacaagtccacaggacgtccatgtcctccgaggagcc
agcgctctgctcgactgtcgcttctaccgagaccctcggctgctcaactaccagatcgtc
tggaagagagacggacagaagctgctggagacgtcagagagtgacaagtacattttcttc
aataatggaactttgaaagtgacggacgtccaatcagtcgacacggcgcaatattcgtgt
gaagtcatcactgacctggacaacgtgcaagccaacggctccatcaccgtcgtggctcga
cccgacccccccaaagatctgtctctgtccaacttggaggaccacagcctcacactcagc
tggatcccgggacactcacacaacagccccatcacagagtacgtggtggaggcccgggag
gagcagcacacggaggaggggaagtggaagtgggagcagtggcaggagttaccagccgac
ttcaaccacctgcagctgaacctccacccccactgcatctaccgcttccgggtcatcgcc
atcaacgcgatcggccgcagccaccccagcaaggcctcggagtcccacgacacgccacct
gctgttcctggcagtaaccccaccggtgtccgcagtgactccacagacccaaagactctg
atcatcacatgggatgagatggacaagcgtttacactacggcccggacttccagtacaag
gtgtcgtggcggcaggccgggggaaagagcgtgcactggaaccacagctactcaaagtct
cccccgttctcggtgaacgacacaggaacctacgcaccgtttgagatcaaagtccaggcc
gtcaactcgctcggagaaggaccggcaccggaagcagagatcggacactctggagaggac
gtacctgaggaggcgccaacgggagtagagtcaacggtgatgaacagcaccgtcagagtg
aagtggagcgaggcgcagggcgtccgagggctgctgctgggatacaagatctacatcagg
aggttgggcgcccaggttgggcggggccggaggtctctggggaaactgcaccatggggac
gaaagaggggagaggtccgaccgagggacggacagagacacagcgagcagagtggaggtc
gtccacggcatgaagacgtccaaggaagtgacggggctgcagctgttctcctcgtacgag
ctgtccgtcactgccttcaacggcaaaggggaggggccccactcgctgcctcaccgcttc
agcacgccagagggagctccgggtcctcctgcatccctgaggtctgagagcccgacagag
aaatccctgattctctactggacgcctccagttgaaacgaacgggatcctgctgggatac
atggttcagtaccaacaagaggtggagagcaaagacagtctgctgcagatggagttcatc
agtgatcccaacgtgacccacatcgcgttggaccatctggaccccagcagccaatacacc
ttcaaagttatagcccgcaccgccaccggtgatggaccccctgtcactctgagtggcgcc
accctgctcgacggagttcctccaacgaacgtcaccgtcgtccaggacaacacgtccttc
aacctgagctggacacctggagagcgagacaggaaccacggcttccacatccactacctc
aggaagagcgctgggggtgagtgggaggagtcagagttagtgaactccacgcagggtttc
tattcgctgacaggcctccaaccaggaactgagtaccacctcatgatccgacatggaaac
gttactcagtggcacgaggagttgtggacgatcggaccagagccttcggagatgcctgct
gggttcgccactcagggctggttgatcggactcgtcagcgccatcctgctgctcatcctg
atactgctcatcctctgcctcatcaaacgcagcaggggcgggaagtacgcagtgaaggac
aaggaagacaaggaggtggactctgaagctcgaccaatgaaagatgagacgtttggagaa
tacagcgatggggatgagaagcgctcggacagccagccgtccctggccggggacagtaag
ctgggcagcgaagactctctggccgagtacggagacagcgtggacatccagttcaacgag
gacggctccttcattggccagtacagcggccgggggccggttccccctggaaacgagagc
tccggtccagcctcccccgtcacagccgccccgcctccccccattgctccgtccatgtcg
agcatcctgaaccggcccagctag
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