Hippoglossus stenolepis (Pacific halibut): 118111619
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Entry
118111619 CDS
T08308
Symbol
lamb2
Name
(RefSeq) laminin subunit beta-2
KO
K06243
laminin, beta 2
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04510
Focal adhesion
hsp04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118111619 (lamb2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118111619 (lamb2)
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Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
LAMININ_IV_B
Laminin_N
Laminin_II
F5_F8_type_C
HTH_64
Motif
Other DBs
NCBI-GeneID:
118111619
NCBI-ProteinID:
XP_035016242
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All DBs
Position
6:complement(23667092..23717681)
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AA seq
1784 aa
AA seq
DB search
MRAPLLTLLCVVAAAAAQVPDYTHGCAHGSCYPATGDLLVGREKNLKASSSCGMRRKEPY
CIVSHLQDEKKCFDCDSRRPYDPVYNTINHRIDNVITTFKPHRKKSWWQSENGKSDVFIQ
LNLEAEFHFTHLIMTYKTFRPAAMLIERSADFARTWQVYRYFAHDCATAFPGISQGPLRN
INDIICESRYSDIEPSTEGEVIYRVLEPAIRIEDPYSPDIQNQLKITNLRVNFTKLHTLG
DNLLDPRAEIKEKYYYAIYELVIRGNCFCYGHASECAPINGIRDDIEGMVHGRCVCNHNT
KGLNCELCEDFHNDLPWKPAEGRNTNACKKCNCNGHSTTCHFDMAVYLATANTSGGVCDD
CQHNTMGRNCEMCKPFYYKDPIKDMRDPRVCVACDCDPDGSQNGGMCDSHTDPSLGMVGG
QCRCKANVEGPRCDKCKTGFFGLSAENPQGCQPCWCDNRGTVLGSSQCDPISGDCFCKRL
VTGRSCDQCLPEHWALNHDLNGCRGCECDIGGALDNLCSMESGQCRCRGHMMGRQCTQVE
SGYFFMAVDHFLYEAELAKMGQGCMLETKEHQPGRPATWTGMGFARVPEGGTLEFLVTNI
PYSMEYDLLIRYESQMPRDWEEVRITVIRPGPIPTSSPCGNTIPDDDRLTVSLHAGARFA
VPPQPVCLERGVTYTLRFEFRRYHDANSILTGADAVILVDSISLMPRHFSMEMFNAGDSA
SSIRKQTYERYRCHEGAKSVSRPLMSDTCAKLITSMSAIINDGALPCNCDPQGSVSSLCD
VRGGQCRCRPNVIGRRCDQCAPGTYGFGPSGCIACGCSLEGSVTRLCDKFTGQCQCRPGA
FGQHCDGCQAGHWGFPNCRPCQCNGHADKCDQRTGACINCKDNTGGDKCDRCANGYYGNP
VLGIPFSGQCRPCPCPDGPNSGRHFAASCYQDNRNRQIICNCNQGYTGDRCDECAPGYFG
NPSQPGGHCQPCQCHNNIDMSDMGACDRQTGECRKCLYNTEGPSCGICKSGYFGDASRRN
CRKCTCNFLGTDSSQCMERGDCVCQRSTGQCQCLQNVIGLTCDHCAPNHWNLASGKACET
CGCDPNNSVTSSCNEFTGQCQCRDGFGGKTCTDCQENYWGDPRTQCRACDCDWRGIETSQ
CNRVTGHCLCQQGVSGVRCDQCARGFSGQFPNCQPCHQCFGDWDRIVQDLAVRTKALAER
AHEIQTTGLTGAYETAFRDLEEKLAQAQGIVNARNATAAAVATLMELIEDLRAQIGETTD
TLNRLEGDLTIVQDSNSEASKELSALEREAKELNLTSEQLHNQLDVLKNSNFLGAYDSIR
SSYNKSRDAERRANQSTTTRPSTVSQSADTRRRTERLITAKKDDFNRKNAANKRALGDLS
TKAQGLDIKKINERVCGAPGDAPCGESPCGGAGCRDDEGNRHCGGLNCNGAVAVADNALE
RAKHAEKELNKAMGEVEGLFNKVAEAKTKAEEAKGKAQAALDKATATKNKVERSNNDLRD
LIKQIRDFLTQEGADPDSIEAVANHVLELSIPASPLQIRHLADEIKDRVRSLSNVDAILA
QTQDNVRKAEQLLLDAKRARHHSEGVKTTAETVKQALVDAKTTQTSAEKAIARAKEDIDM
TEARLAQIESETSNGEKDLNDAMDRLGILGQEINALKTKRANNSMAAARAEETATMARDK
ANEAKQILDGQLTDKYHEVQQRVDSKAKAVQDAKKRAEGLRDEAKELLRDAQNKLQRLAE
LEKNYEENQRRLEGKARQLDGLEDKMKAILNDINRQIQIYNTCQ
NT seq
5355 nt
NT seq
+upstream
nt +downstream
nt
atgcgggccccgctgttgacgctgctctgcgtcgtggctgctgccgctgcccaggtgccc
gactacacccacggctgcgctcatggcagctgctacccggcaacaggggacttgctggtc
ggaagggagaagaatctgaaggcctcatcttcatgtgggatgaggagaaaagagccgtac
tgtatcgtcagtcatcttcaggatgagaagaagtgttttgactgtgactctagacggcca
tatgaccccgtctacaacacgatcaatcaccggatagacaacgtaatcaccaccttcaaa
cctcaccgcaagaagtcctggtggcaatctgagaatggaaagtctgatgtctttatccaa
ttgaatctggaagcagagtttcatttcactcacttgatcatgacctacaagaccttccgt
ccagcggccatgctgatcgaacgctcagcagatttcgctcgcacctggcaggtctaccgc
tacttcgctcacgactgcgccactgccttcccaggaatctcccagggtcctttgcgtaac
attaatgatatcatctgtgagtcgcgttattctgacattgagccttcaacagagggagag
gtcatctacagagtgttggagcccgcaatcaggattgaagatccatacagcccggacatc
cagaaccagctgaagatcacaaacctgagagtgaacttcaccaaacttcacacactggga
gacaacctgctggacccgagagcagaaataaaggagaagtattactatgccatatatgag
cttgtcatacgaggaaactgcttttgctacggccacgcctccgagtgcgcccccatcaac
ggcatcagggatgatatagaaggaatggttcacggcaggtgtgtgtgtaaccataacacc
aagggtttgaactgtgagctatgtgaggacttccacaatgacctgccctggaaaccagct
gagggacgcaacaccaacgcctgcaagaagtgtaactgtaacggccactccaccacgtgc
cactttgacatggcggtgtatttggccacggctaacaccagcggaggagtgtgtgacgac
tgtcagcacaacaccatgggacgtaactgtgagatgtgcaaaccgttctactacaaagac
cccatcaaggatatgagggacccacgcgtttgcgtagcgtgtgactgcgacccggatggt
tctcagaatggggggatgtgcgacagccacacagacccttccctcggcatggtgggaggt
cagtgccgttgcaaggccaacgtcgaggggccgcgttgcgacaagtgtaaaaccggcttc
tttggcctgagcgccgaaaaccctcagggctgccaaccttgctggtgcgacaacagagga
accgtgttaggaagctcccagtgtgaccccatcagtggagactgcttctgcaagcgactc
gtcactggacgcagctgtgaccagtgtctgcctgaacactgggcactgaaccacgacctg
aacggctgcagaggttgcgagtgtgacatcggaggagcgctggacaacctctgctccatg
gagagcggtcagtgtcgctgccgcggccacatgatgggacgccagtgtacgcaggtggag
tccggatatttcttcatggctgtggatcacttcctgtatgaggcagagttggccaaaatg
ggtcagggctgtatgctggagaccaaggagcaccagccaggtcggcctgccacctggacg
ggaatggggttcgcccgggttcctgagggcggcaccctggagttcctcgtcacgaacatt
ccctactccatggaatatgacttgctcattcgctacgagtcacagatgccacgggactgg
gaggaggtgcggataacggtgatccgtccagggccgattcctaccagcagcccgtgtgga
aacaccatcccagatgatgacaggctcacagtctccctgcacgctggagccaggtttgcg
gtccctcctcagcctgtgtgtctggagagaggtgtgacatacaccctccgctttgagttc
cgacgctatcatgatgccaacagtatccttaccggagccgacgccgtcatccttgtggac
tcgatctccttgatgccacgccacttctccatggagatgttcaacgcaggggattcagcc
tcgagcatcaggaagcagacctatgagcggtaccgctgccacgagggggcgaagagtgtg
tcccgcccgctgatgagtgacacctgtgccaagctcatcaccagcatgtcggccatcata
aatgatggcgctctgccttgtaattgcgacccccagggctccgtcagctctttgtgtgat
gtccgcgggggccagtgccgctgcaggcccaatgtgattggtcgacgttgtgaccagtgt
gcgccaggaacttatggcttcggaccctcaggctgcatagcctgcgggtgcagcttggaa
ggctctgtgactcgactctgtgacaagttcaccggtcagtgccagtgccgcccgggagcg
tttggtcagcattgcgacgggtgccaggcgggtcactggggtttccccaactgccgacca
tgccagtgtaacggacatgcagacaagtgcgaccagaggaccggagcctgcatcaactgc
aaggacaacactggaggagacaagtgtgacaggtgtgccaatggttactacggtaaccca
gttctgggcataccatttagtggccagtgtcgtccgtgcccctgtccagacgggcccaac
agcggacgccactttgctgcatcttgttaccaggacaaccgtaacaggcaaataatctgc
aactgtaaccagggttacacaggtgatcgatgtgatgaatgtgccccgggttattttggc
aacccctcgcagcctggtgggcactgccagccgtgccagtgccacaacaacatagacatg
tcggacatgggtgcgtgtgacaggcaaaccggagagtgcaggaaatgcctctacaacact
gagggcccgagctgcggcatctgcaagagcggctatttcggggatgcttcccgacgcaac
tgcaggaagtgcacttgtaacttcctgggtactgatagcagccagtgtatggagcgggga
gactgtgtgtgccagcgctccacaggccagtgccagtgtctgcaaaacgtcataggtctg
acatgtgaccactgtgcccccaaccactggaacctggccagcgggaaagcctgtgaaacc
tgcggctgtgaccccaacaactctgtcacctcctcgtgtaatgagtttaccggtcagtgt
caatgtcgtgatggctttggagggaagacatgcacagactgtcaggagaactactgggga
gaccccaggacgcagtgcagagcctgtgactgtgactggcgtggcattgagacctctcag
tgtaaccgtgtgactggccactgcctttgccagcagggggtgtcaggtgtgcgctgtgat
cagtgtgccagaggcttctctggccagttccccaactgtcagccctgccaccagtgcttc
ggggattgggatcgcattgttcaggacctggcagtgcgcaccaaggctctggcagagcgt
gcccatgagattcagaccactgggctcactggcgcctatgagacggccttcagagatctg
gaggagaaactggcacaggctcagggaatcgttaatgcacgcaatgccactgctgcagct
gtagctaccctaatggagcttattgaagatctaagggcacagatcggtgagaccacggac
accctgaaccgtctggaaggagacctaaccatcgtacaggacagcaactctgaggcaagc
aaggagctgagtgctctggagcgagaggccaaagaactaaacctcacttctgagcagcta
cacaatcagctggacgtcctgaaaaactctaacttcctaggtgcatacgacagcatccgt
agctcctacaacaagtctcgtgatgctgagaggcgtgccaaccaatcgacaaccaccagg
cccagcacagtcagccaatctgcagacacccgccgacgcaccgagcgccttatcaccgcc
aagaaggacgacttcaatcgtaaaaatgcagctaacaagcgtgcgctgggagacctcagc
accaaagcacagggcctggacataaagaagatcaacgagagggtgtgtggtgccccgggt
gatgctccctgtggggaaagcccatgtgggggtgcaggttgccgtgatgatgagggaaac
cgtcactgtggaggcctgaactgtaacggggctgtggcagtagctgacaatgctttggag
agagccaaacacgcggagaaggagctgaacaaagctatgggagaggtggagggactcttc
aacaaggtggcagaggccaagaccaaagcagaagaggccaagggtaaagcccaagcagct
ctggacaaagccacagccaccaaaaacaaagtggagcgctccaacaatgacctgagagac
ctcatcaaacagatcagggacttcctcactcaggagggagccgatccagacagtattgaa
gcagtggcaaaccatgttttggagctctccatcccagcttcgcccctccagatcagacat
cttgctgatgaaatcaaagatcgggttcgcagcctctcgaatgtggatgccatcctggcg
cagacacaggacaatgtccgaaaggcagaacaactgctgctggatgccaagagggcaagg
catcattctgagggagtaaagaccacagcagagacagtaaaacaggccttggtggatgct
aagactacccagacctcagcagagaaagccatagcaagagccaaagaggacattgacatg
actgaggcccgactggcacagatcgagtcagagacgtccaacggtgagaaggacctgaat
gatgccatggaccgcctgggcatcctgggacaggagatcaatgccctgaagaccaaacgt
gccaacaacagcatggcagcggcccgagccgaagagacagccaccatggcacgagacaaa
gcaaatgaagccaagcagattctagatggccagctgacagacaaataccacgaggtgcag
cagcgggttgacagcaaggccaaggccgtgcaggacgcaaagaaaagagctgagggcctc
agagacgaagcaaaggaactactgagagatgcccagaacaagctgcagagactagcagag
ctagaaaagaactatgaggagaaccagaggaggttggaggggaaagctcgtcagctggac
ggcttggaggacaagatgaaagccatcctcaatgacatcaacagacagatccagatctac
aacacgtgtcagtaa
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integrated database retrieval system