Hippoglossus stenolepis (Pacific halibut): 118111627
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Entry
118111627 CDS
T08308
Symbol
her9
Name
(RefSeq) hairy-related 9 isoform X1
KO
K06054
hairy and enhancer of split 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03460
Fanconi anemia pathway
hsp04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
118111627 (her9)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
118111627 (her9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsp03000
]
118111627 (her9)
03400 DNA repair and recombination proteins [BR:
hsp03400
]
118111627 (her9)
Transcription factors [BR:
hsp03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
118111627 (her9)
DNA repair and recombination proteins [BR:
hsp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
118111627 (her9)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_IRO3
Spectrin_1st_PEPL
Motif
Other DBs
NCBI-GeneID:
118111627
NCBI-ProteinID:
XP_035016264
LinkDB
All DBs
Position
6:complement(15007731..15009727)
Genome browser
AA seq
291 aa
AA seq
DB search
MPADTMEKQTASPIAGAPATGSHTPDKPKNASEHRKSSKPIMEKRRRARINESLGQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNMQRVQMSAALSADATVLSKYRAGFNECTNE
VTRFLSTSEGVNTEVRSRLLNHLSSCMGQMMSMNYPQQVPSQQAHLAQPLHVQLPSTLPI
SGASMGSKLSPVEAISPKVFGGFQLVPASDGQFAFLIPNPAFASATAPVIPLYANAGVPV
AVNASPVHCSSAPTAASPVHGMTSFSGGSQAVSPVGVSTGSESNEPVWRPW
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgacactatggaaaagcagacggcgtcccctattgccggggcccctgcgacc
ggatcacacacgccggacaaaccgaaaaatgccagcgagcacagaaagtcatccaaacca
atcatggaaaaacgccggagagcgagaattaacgaaagcctcgggcagctgaagacactc
atcctggacgcactcaaaaaagatagctccaggcactccaagttggagaaagcagacatc
ctggagatgacagtgaaacacctgaggaacatgcagcgcgtgcagatgagcgcagcgctc
tcagcagatgccaccgtcctgagtaaatacagagccggattcaacgagtgcacgaacgag
gtcacccgcttcctgtccacctcagagggggtgaacacggaggtgaggtcgcggctcctc
aaccacctctccagctgcatgggccagatgatgtccatgaactacccgcagcaggtcccg
tcccagcaggcgcatctggcgcagcctctccacgtgcagctcccatctaccctccccatc
agcggcgcttccatgggctccaagctcagtcccgtcgaggccatctcccccaaggtgttt
ggtggcttccagctcgtgcccgcatccgacggacagttcgcttttttgatccctaacccg
gcctttgcctccgctacggccccggttatccccctttacgcaaacgcaggagtgcctgtc
gcggttaacgccagcccggtgcactgcagctcggcgcccactgcagcatctccagtccac
gggatgacgtccttctccggggggtcccaagcggtcagccctgtgggtgtcagcaccggc
tccgagagcaacgagcccgtgtggcggccttggtag
DBGET
integrated database retrieval system
