Hippoglossus stenolepis (Pacific halibut): 118111660
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Entry
118111660 CDS
T08308
Name
(RefSeq) contactin-3
KO
K06761
contactin 3/4/5/6
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hsp04515
]
118111660
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
hsp00537
]
118111660
Cell adhesion molecules [BR:
hsp04515
]
Immunoglobulin superfamily
Contactins
118111660
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
hsp00537
]
Others
118111660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Ig_4
Izumo-Ig
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
118111660
NCBI-ProteinID:
XP_035016341
LinkDB
All DBs
Position
6:complement(15637180..15675184)
Genome browser
AA seq
1026 aa
AA seq
DB search
MTLLWKQFLLLSIIDCLADCLDSGSYHGPRWRMEPGDLFIPVDSIEEEATLTCDAKGTPP
PQYRWSLNGTLINLGQDPRRRLSGGNLIISSLDRQQDVGVFQCMAYNTVGAILSRRASLQ
FAYLDHFKVHTRSAVSVREGQGVVLLCGTPTSSGDLSYAWIFNEYPYFVQQDNRRFVSQQ
TGNLYISKVEPSDVGNYTCVVMNSVTKGKVHSSPTSLILRTDGVMGEYEPKIEVNFPDNV
PAAKGSTVTLECFALGNPVPEITWKRANGVPFPSKVKMKYSNAVLEIPSFQQDDAGGYEC
LAENKMGKNTATGRLAFYAKPQWIQTMKDTALAIEERLYWECRANGKPKPSYTWLKNGQQ
LLSEGRIHVEDGVLSVSALTLSDAGMYQCVAENKHGVIYFAAELMVLASPPDFTGNVLRA
LLKAKAGSTVTLECKPQAYPIASILWKKGNLPIHTNDRITLSPDGTLRLANVSKSDAGSY
TCFARNRFGMSSTTGRLLVTDPTRIIQGPVNMEIIVGESIVLPCQVASDPVLDVSFSWAF
NGQLIAKGDGHFEHVGGRTAGDLMIRNIQLFHAGKYICVVDTDVESLSAVAVLIVKGPPS
PPDSVTVEEVTDSTAQLTWSPGRDNGSPITNYLIQTRTPFTVGWQRVNTVPEIIYGNTLT
ATVVDLNAWVEYEFRVLAKNSVGVGEPSPVSVKTRTEDAVPDAAPGDVGGGGGSRSELVI
TWEPVPEELQNGESFGYIIAFRAFGEVSWTHVATSAPGASRYVYRNDSILPFSPFHVKVG
TYNSKGQGPFSPVVTIYSAEIEPSGMPAGVWARSVSASEIEVNWQAISFTPERVLGYEVV
YWEDDTKPETMGKVRVPWNQTSVTVSGLAGNTQYFLTVSAFNTAGTGPFLPAINVTTKKP
PPAQPPLNIEWTLIGSQLSLYWEPVVAMESECEVTGYQLSYRRQRHKEVNTLTTSNCTAE
LTLPEDDDDYIIHIQTLSEGGLGPASDPIRIHQLSMSARGSRAWSLDISPLSLILALAIS
TFRSTS
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgacgttgctatggaaacagtttctgctgttatcaatcattgactgtctggcagattgt
ctagacagtggatcatatcacggtccaagatggaggatggagccaggtgacttgttcatt
cccgtcgactccatagaagaagaggccactctgacttgtgacgctaagggaacgcctcct
ccacagtacagatggtcactgaatgggaccctcataaatctgggccaggatccccggcgg
cgtctgtctgggggcaacctcattataagcagcctggaccgccagcaggatgtgggggtg
ttccagtgtatggcctacaacactgtaggagccatcctcagccggagagccagtctgcag
tttgcctacttagatcatttcaaagtccacaccagaagcgcggtgtcagtccgagaggga
caaggagtggtgctactttgtggaacgcccacatcctcaggcgacctttcttatgcatgg
atcttcaacgagtatccatactttgttcagcaagacaatcggcgtttcgtgtcccagcag
acgggaaacctttacatttccaaggtggagccctcggatgtgggtaactacacttgcgta
gtgatgaacagcgtcacgaagggcaaagttcacagctcacctacgtctctgatcctcagg
acagacggagtgatgggtgaatacgagccaaaaatagaagttaatttcccagacaatgta
cccgccgctaaaggatcaacagttacactggagtgtttcgcccttgggaaccccgtccca
gagatcacctggaagagggcgaacggcgtgcccttccccagcaaagtcaagatgaagtac
tcgaatgccgtgctggagatccccagcttccagcaggacgacgccggagggtacgagtgc
ttggctgagaacaagatggggaagaacacagccaccggtcgacttgctttttatgccaag
cctcagtggatccagaccatgaaggacacggccctggccatagaggagagactgtactgg
gagtgtcgagccaatggcaagcccaagccctcctacacgtggctgaagaacggccaacag
cttctctccgagggcaggatccatgtggaggacggagtcctgtcagtgtccgcgctgaca
ctctctgacgccggcatgtaccagtgtgtggctgagaataaacacggtgtcatatatttc
gctgctgagctgatggttttagcttctcctccagacttcacagggaacgtcctcagagct
ttgctcaaagccaaggcaggaagtacagtgactttagagtgtaaacctcaggcctatccc
atcgccagcatcttatggaagaaaggaaacctgcccatccacaccaacgacaggatcaca
ctttctccagatggaacgctgaggcttgccaacgtgagcaagtcggacgcgggcagctat
acgtgcttcgctcggaatagatttggcatgtcgagcacgacaggacggcttctcgttacc
gatccaaccagaatcatccaggggcctgtgaacatggagatcatcgttggcgagagcatc
gtgttaccgtgtcaggtcgccagtgaccccgtccttgacgtttccttctcctgggccttt
aacggacagctcatcgccaagggagacggtcactttgagcacgtgggtgggcgcacagcg
ggagatctgatgatcagaaacattcagcttttccatgccggcaagtacatctgcgtggtg
gacacagacgtggagagcctgtcagctgtggctgtattgattgtgaaaggcccccccagc
ccaccagactctgtgacggtggaggaggtgacagacagcacagctcagctgacctggagc
ccaggcagagacaacggcagccccatcaccaattacctcatccagaccaggacccccttc
actgtgggctggcagcgggtcaacacagtccctgagataatttatgggaacacgctgaca
gccactgtggtcgacctcaacgcctgggtggagtacgagtttcgggttttggccaagaac
agcgttggagtcggagaacccagccctgtgtccgtcaagaccaggacagaggacgcagtc
cctgatgcagctcccggtgacgtgggcggaggaggcggaagcagatctgaactggtcatc
acatgggagcctgtccccgaagaactgcagaatggtgagagctttggttacatcattgct
ttccgcgccttcggagaagtcagctggacccacgtggccacctccgcccccggcgcgtcg
cgctacgtgtaccgcaacgacagcatcctgcccttctctccgtttcatgtcaaggtcgga
acttacaacagcaaaggacagggtcccttcagccctgtggtcaccatctactctgcagag
atagagccaagtgggatgccagcaggagtttgggccagaagtgtctcagcctccgagatt
gaggtgaattggcaggcgatctccttcacccctgaaagagttctgggctacgaggtggtt
tactgggaggacgacactaaaccggagaccatggggaaggtcagggtgccttggaaccaa
acctcggtcacagtgagcggcttggctggaaacacgcagtatttcctgacagtcagcgcc
ttcaacacagcggggaccggccccttcctccctgcaatcaatgttaccacaaaaaagccc
ccaccagctcagcctccactcaacattgaatggactctaattggctctcagctgtctctt
tactgggaacctgtggtggctatggaatcagagtgtgaagtaacgggctaccaactgtca
tacaggaggcagagacacaaagaggtaaacacactcacgacatccaattgtacagcagag
ctgaccctccccgaggacgacgacgactacatcatccacattcagactctgagtgaagga
gggctcggcccggcctcggaccctatacgaatccaccaattaagtatgagtgcccgtggc
tcgagagcctggagcctggacatctcgcccctctccctgatcctcgccctcgcaatatca
acattcaggtcaacgtcatga
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