Hippoglossus stenolepis (Pacific halibut): 118111678
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Entry
118111678 CDS
T08308
Name
(RefSeq) granule associated Rac and RHOG effector protein 1
KO
K26671
granule associated Rac and RHOG effector protein 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsp03019
]
118111678
Messenger RNA biogenesis [BR:
hsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
118111678
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DUF4745
Motif
Other DBs
NCBI-GeneID:
118111678
NCBI-ProteinID:
XP_035016381
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Position
1:24150235..24183101
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AA seq
1105 aa
AA seq
DB search
MYCCSAQESKMDYKRRFLLGGSKQKVQQHQQYQMPELSRTLSASLASTCSASSPIGTGVG
MPGSCHPPPSAATTAVADIQQGISKYLDALNVFCRASAFLTDLFSSVFRNSHYSKAAMQL
KDVQEHVMEAASRLTAAIKPEIAKMLMELSAGAANFKDQNDFSLQDVEVLGRCFLTVMQV
HFQFLSQALQKVQPVAQSCLAEALAQAQERCANARSQGSDLGPLTELEDASRSWKGAAEA
TARLRERGRDGCLAGIQVQQLFCSNNTIIPEHQLKDLNMKIDNALQAYKAALESLGHSEY
ALKGGFHLNPKAVEVALQGCCSEAEAQQAGRMQTTSQPIQCELPTIPLQIGSHFLKGVSF
NESAAENLKLKTHTMLLLIKEALGQNGVTPRDDSPVTEVLNHVCPSRWRGACKTAVQLLF
AQAGLVVVDTAQIENKEAYAPQITLEGSKVVVQVPSTWCLKEDPATMSLLQRSLDPEKTL
GLVDMLYTAVFDINRWKERKEQALPTIQIQLQREIPDYGAHVDLPLGTSSKTSSGLPKTI
SKLTSKFTKKVSSSSNSGGSYSIPSTPSRSMLSTSSSEDKAKSLGHSDGRLQSILQMASL
SSTPDPTQQSQLANGLVSDDQGMNLPTDQEMQDVIDFLSGFNMGKSQQASPLVKRRNSVA
SANPAELKPPSGPPPTSQTISLQPPAQTMPQPQPPAVQKQQQQPQPQPPPPTPQQQQQPQ
QPPPAPQQPSPQALQYYQHLLQPISQQQPPPPQLPPQQTPPQVLPQQRVASKWLGTSGQQ
PPPQGPPAGLSPLGPIGQWGSPGLPDLSSDLYSLGLVSTYMDSVMSEMLGQKPQGPRNNT
WPNRDQSEGVFGVLGDTLPFDPAVGSDPEFARYVAGVSQAMQQKRQVQHIRRPSNTRSNW
PMPDEQHRTWSHPEYYSEGEAVNSSWSANQGDSASSSDETSSANGDSLFSMFSGPDLVAA
VKQRRKHSCGEPEVCTLPSPPLHHIGDDSQDSKTKTWPPKAPWQHSTHTNTMPNPSSSLY
QMNIPPSSQWSDSMQMLQSPVWSTASDCSPSTCISSGFPSFTQQQQQQQQQQQQQQQQQQ
HKPMTKGFKSFPLKHEHRPSYLHQY
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgtattgttgtagtgcacaggaaagtaaaatggactacaagcgtcgctttttgctcggc
gggtccaagcagaaagtgcaacagcaccagcagtaccaaatgcctgagctgagccggacc
ctgagcgcctcgctggcctccacttgttcggcatcttcgcccattggcactggtgtgggc
atgcctggcagctgccacccgcccccttccgctgccaccactgcggttgcagacatccag
caaggcatctcaaaatatttggatgccctcaacgtgttctgccgggccagcgccttcctc
acagacttgttcagcagtgtgttcaggaactctcactattccaaagcagctatgcaactg
aaggacgtgcaggaacacgtcatggaggcggccagcaggctgactgcagcaataaagcct
gagattgccaagatgctgatggagctgagcgctggtgccgcaaatttcaaagaccagaac
gacttcagcctgcaggatgttgaggtactgggtcggtgcttcctcactgtgatgcaggtc
cacttccagtttctatcacaggctttgcagaaggtccagcctgtcgctcagtcctgcctg
gcggaggctcttgcccaggcccaggagcgctgcgccaacgcccgctcccaaggctcagac
ctcgggcccctcacagagctggaggacgcctcccgctcatggaaaggtgcagctgaggct
acggcgaggctgagagagaggggccgggacggctgcctggcaggcatccaggttcagcag
ctcttttgctccaacaacaccatcatccctgagcaccagctgaaggatcttaacatgaag
attgacaatgctttacaggcctataaagcagcactagagagcctgggccatagtgagtac
gcactgaagggtggctttcatcttaaccccaaagctgtggaggtagccttacagggctgc
tgcagtgaggcggaggcccagcaggcagggaggatgcagaccacctcccagcctatccag
tgtgagctgcccactatccccctgcagatcggctcacatttcctcaaaggagtgtccttc
aacgagtcagcggctgaaaaccttaaactgaaaacgcacacaatgctgctgctcattaag
gaggcgcttggccagaacggagtgaccccaagagacgactctcctgtcactgaggtcctc
aaccacgtctgcccatccaggtggagaggagcctgcaagacagctgtccagctgttgttc
gcccaggctggtctggtggttgttgacacagctcagattgagaacaaggaggcctacgct
cctcaaatcactctggagggctccaaggttgtggtccaagttccttctacatggtgtctg
aaggaggacccagccaccatgtccctgctccagcggagtttggacccagagaaaacactt
ggtctagttgacatgctctacacggctgtgtttgacatcaacaggtggaaggagagaaaa
gagcaggccttgcccactattcagatccagctgcagcgggagatcccagactatggcgcc
catgtagaccttcctctaggcaccagctccaagacctctagtggattgcccaaaactata
tccaagctgacttccaagttcaccaagaaggtctcatctagctcgaacagtggcggcagt
tactccatcccgagcacgccgtctcgcagcatgctaagcaccagtagctctgaggataag
gccaagagtctgggccacagtgacgggaggctacagagtatcctgcagatggccagcctg
tcctccactcctgaccctacacagcaaagccagctggccaacggcttggtgtccgatgac
cagggaatgaacttgccaactgaccaagagatgcaggatgtcatcgactttctctcagga
ttcaacatgggtaaatctcagcaggcctcgcccctggtcaagaggaggaactctgtggca
tctgcaaacccggctgaactgaagccgcccagtggacccccaccaacgtcccagactatc
tccctacagcccccagctcagacaatgccccagcctcagcctccagcagtgcagaagcag
cagcagcagccacaaccacagccacctcctcctactccgcagcaacaacaacaaccccag
cagcctcctcctgctcctcagcagccctccccgcaggccctgcagtactaccagcacctc
ctgcagcccatcagtcagcagcagccccctcctcctcagcttcctcctcaacagacccca
ccacaggtcctgccacagcagagagtggcaagcaagtggctcggcacatccggtcagcaa
ccaccaccccaaggccccccagcagggctgtcacctctgggacccatcgggcagtggggg
tcccctggactgccagatctgagctcagacctgtacagtctcggcctggtcagcacctac
atggacagtgtcatgtcagagatgctcggtcagaagccgcagggaccccgcaacaacacg
tggcccaacagggaccagagcgagggggtgtttggagtcctaggagacacgctgccattt
gacccagcagtcggctcggatccagagtttgcacgttacgtcgccggtgtcagtcaggcc
atgcagcagaaacggcaggtgcagcacatccgtcgccctagcaacacgcgcagcaactgg
ccaatgcccgatgagcagcatcgaacctggtcccaccctgagtattacagtgagggtgag
gccgtgaacagcagctggtcggccaatcagggggactcggccagctccagcgatgagacg
tcctcagccaatggggacagtctattctccatgttttctgggcctgacctcgtagcagca
gttaaacaaaggagaaaacacagctgtggtgagccggaggtgtgcaccctgccctcccca
ccactccatcacattggcgatgacagccaggacagcaaaactaaaacctggcctcccaaa
gccccatggcagcactccacccacaccaacaccatgcccaatcccagctcttccttgtat
cagatgaacatccctccttcctcccagtggagcgactccatgcagatgctgcagtctcct
gtgtggtccactgccagcgactgctccccctccacctgcatctcctctggttttcccagt
ttcacccagcagcagcagcagcagcagcaacaacagcagcagcagcagcaacagcagcaa
cacaaacccatgactaagggctttaaatccttccccctcaaacacgagcacaggccctcc
taccttcaccagtactga
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