Hippoglossus stenolepis (Pacific halibut): 118111685
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Entry
118111685 CDS
T08308
Name
(RefSeq) probable E3 ubiquitin-protein ligase DTX3 isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
118111685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsp04121
]
118111685
Enzymes [BR:
hsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118111685
Ubiquitin system [BR:
hsp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118111685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-rbx1
zf-C3HC4_4
zf-RING_10
RING_XB3-XBAT31
zf-RING_6
zf-RING_11
Baculo_IE-1
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
118111685
NCBI-ProteinID:
XP_035016386
LinkDB
All DBs
Position
6:complement(13650448..13653623)
Genome browser
AA seq
220 aa
AA seq
DB search
MRTRKQLAVLVASQPEEKKMENTRNKKKKSSEDCAICLDQIQEEKTLACRHSFCAHCIDQ
VFRVKPACPICNTYHGAYTGTQPRGTMAVTRSWQRLPGYEHCGCIIIQYSFPGGIQGVRR
LTPEHPNPGVHYSGTDRTAYLPACKEGEKVARLLKKAFDRRLIFTIGQSATTGLNNVITW
NDVHHKTSTTGGPQCFGYPDPAYLFRVQEELRLQGVTEDN
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacgcggaagcagctcgcagtgcttgtggcgtcacagccggaagaaaagaagatg
gaaaacaccagaaacaagaagaagaagagttcggaggactgcgccatttgtttggaccag
attcaggaggagaagacactggcgtgtcgtcactctttctgcgcccattgcatcgaccaa
gtcttcagggtgaagcccgcgtgtccgatctgcaacacctatcacggcgcgtacacgggg
acccagccgcggggcacgatggcggtgacgcgcagctggcagcggctgcccgggtacgag
cactgcggctgcatcatcattcagtacagtttccctggggggatccaaggggtgaggaga
ctgacgcccgagcacccaaatcctggggtgcattacagcggcaccgatcgtacagcctac
ctgccagcctgcaaggagggagagaaggtggcgaggctgctgaagaaagcgttcgaccgg
agactcatcttcaccatcggacaatctgccaccacgggcctcaacaacgtcatcacctgg
aacgacgttcaccacaagaccagcacgaccggcggcccacaatgttttggatatccagac
ccagcatatctgttcagggttcaagaggagcttcgtcttcaaggagtgacagaggataac
taa
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