Hippoglossus stenolepis (Pacific halibut): 118111842
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Entry
118111842 CDS
T08308
Symbol
rnf20
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1A
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsp04121
]
118111842 (rnf20)
Enzymes [BR:
hsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118111842 (rnf20)
Ubiquitin system [BR:
hsp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
118111842 (rnf20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
zf-C3HC4
CC_Bre1
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
BRE1
Bacillus_HBL
zf-RING_2
DUF7049
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
118111842
NCBI-ProteinID:
XP_035016460
LinkDB
All DBs
Position
7:complement(16817513..16828521)
Genome browser
AA seq
1027 aa
AA seq
DB search
MSGQKRPGDPGGPSSSGAPSEKRRERDGEDGGPGVSAAAGGSTAVETVIKLGGVSNSEEQ
DIKALQAKNRKLGEALDQRQVIEDELRERIERLETRQATDDASLLILNRYWNQFDENVQL
ITRRYDQASIEPEKSPGAEGRSLKPDTPEPDGDSNQERVKDRGHQGETSNSFLATLASST
SEEMEAELQVRVESSQKQANRVVEIYECLKRTVDQLKAEVDPGAEGSLWKAASTLNSLLS
SENERLQQLSEDLKQKHSHMTSESRSLGRAANKADQRVSELQVLIEELQWDMEKIRRREN
RLNAHLSEILERVNSKGYKVCGEASSVCGTITINKRKFEEMNSELEENRELADNRLTELQ
KLQQDLQTVHQENNNMKTELMSRAEGMVKETSEYRCLQSQFSVLYNESLILKGQLDETRA
RLNTTRTARLRQLEHMENDEVALQRKVRTEVFQLEDTLAQVRKEYEMLRIEFEQTLAANE
QAGPINREMRHLISTLQTHNQQMKGEVVKYKIRLRETQAELNQVRASKGSAILQSQSSSE
IDIKDETTSPSTPAISGEPAVKTEPDNGSSTPSSTGASVKTEPGVEPEATVKEEEKDEKK
EREEKKEKDTVKKEEKDREREKEKEKERDRPTRSSGSSSSVIKEEKEKSGSSGQPEESAG
ERLSVVGGSKRKEMEQLKIVRAELKKAQESQREMKLLLDMYRSAPKEQRDKVQLMAAEKK
SKSEGEELRQRLRELEERERREGKKMADEEALRKIRSVEEQIDILNKKLSIAKQEEDALL
SEMDVTGQAFEDMQEQNIRLMQQLREKDDANFKLMSERIKSNQIHKLLKEEKEELADQLL
TLKTQVDAQLQVVRKLEEKERLLQGTISTAERELALRTQALDMNKRKAQESALLSEEVRT
QLEQVQQRLGLVREEVVENSISREKESFNARRAQEDISKLRRKIEKAKKPAEKISNGDDI
LNEEINDYKARLTCPCCNSRVKDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAFGAND
FHRIYIG
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggccagaaacgtcccggtgatccgggcggcccctcgtcctctggtgcgccctca
gagaagcggagggagcgggacggtgaggacggaggtcccggtgtcagcgccgcggccggg
gggagcaccgcggtggagacggtcatcaaactgggaggggtgtcaaactctgaagaacaa
gacatcaaagctctccaggctaagaaccgaaagttgggagaagccctcgatcaaagacag
gtgattgaggacgagttgcgagagaggatcgagaggctggagacccggcaggccaccgat
gatgccagtctgctgatcctcaatagatactggaaccagtttgatgaaaacgtccaactg
atcaccaggcgttatgaccaagccagcatcgaacctgagaaatctccgggggctgagggc
cggagcctgaagccagatactccagaacctgatggcgactccaaccaggagagagttaag
gacagaggccaccagggagagacatccaactccttcctggccacgctggcgagcagcacc
agcgaggagatggaagctgagcttcaggtgagagtggagtccagccagaaacaggccaat
cgtgtggtggagatctatgagtgtctgaagcgcactgtggaccaactgaaggcagaggtg
gaccctggagctgagggcagtttgtggaaggcagcatccacactgaactccctcctgtcc
agtgaaaatgagcggctacaacagctgtctgaggacctcaagcaaaagcacagtcacatg
acgagcgagtcccgctctctgggtcgtgcagctaacaaagcagaccaacgtgttagcgag
ctgcaggttctgatcgaggagctgcagtgggacatggagaagatccgccgccgggaaaac
cgcctgaatgcacacctgagtgaaatactggagagggtgaacagcaaaggctacaaggta
tgtggagaggccagtagcgtatgtgggaccattactattaacaagagaaagtttgaggaa
atgaacagcgagttggaagagaaccgtgagctggcagacaaccgcctcactgagctgcag
aagctccagcaagacttgcaaactgttcaccaggagaacaacaacatgaagacggagctg
atgagtcgagcagagggcatggtgaaagagacttcagagtatcgttgtctgcagtcacag
ttttctgttctctacaacgagtctctaatcctcaagggtcaattagacgagacacgcgct
cgtctcaacactaccaggacggcacgcttgcgacagctggagcacatggagaatgatgaa
gtggctctgcagaggaaggttcgtacagaggtgtttcagctggaggacactctggctcag
gtcaggaaggagtacgagatgttgcgaatagaatttgaacagactcttgctgccaatgag
caagcaggtcctattaacagggaaatgcggcacttgatcagcacactgcaaacccacaac
cagcagatgaagggagaggtggtgaaatacaagataagactgagagagacacaagctgaa
ctcaaccaggtccgtgcctcaaagggcagcgccatcctccaatcacagtcaagctcagag
atcgacattaaggatgagacgacctctccttcgaccccagctatctctggagaacctgca
gtcaagactgagcctgacaacggctcctcgacacccagcagcactggtgcctcagtgaaa
acagagcctggcgtggaaccagaggcaacagtaaaagaggaggagaaagacgagaagaaa
gagagggaggaaaagaaagaaaaggacactgtaaagaaagaagagaaagacagagaacgg
gagaaagagaaggaaaaggagagagataggccgacccgcagcagtgggagcagcagcagt
gtgataaaggaagagaaggagaagtccgggagcagtggccaaccagaagagtcagctggg
gagcgtctgtctgtggtcggagggtcaaagaggaaggagatggagcagctgaagattgtc
agagcagaactcaagaaagcccaggagtcccagagggagatgaagctgctgctggacatg
taccgctcagcacccaaagagcagagggacaaagtccagctcatggctgcagagaaaaag
tccaagtccgagggagaggagctgcggcagaggctaagggagctggaggagcgggagagg
agggagggcaagaagatggcagatgaagaggctctgaggaagatccgttctgtggaggag
cagatcgacatcctcaataagaagctctctatagccaaacaggaggaggacgcactgctg
agtgagatggacgtgacaggccaggccttcgaggacatgcaggaacagaacatccggctg
atgcagcagctcagagaaaaagacgatgccaacttcaagctgatgagcgagcggatcaag
tccaaccagatccacaagctgttgaaagaggagaaggaggagctggcggatcagcttctc
accttaaaaactcaggtcgatgctcagctgcaggtggtgaggaagcttgaggagaaggaa
cgcctcctgcagggcaccatcagcactgctgagagagagttggcacttagaacacaagcc
ttggacatgaacaaacgcaaggctcaggaatctgcattgctgtcggaggaggtgcgaact
cagctggagcaggttcagcagaggctcggtttggtcagagaggaggtggttgagaacagt
atctccagggagaaagagtcctttaatgctcgacgagcacaggaggacatctccaaactt
aggagaaagattgaaaaggccaagaaaccagctgagaaaataagcaatggcgatgacatc
ttaaatgaagaaattaatgattacaaggcacgtctaacatgtccgtgctgcaactcccgg
gtgaaggacgctgtactgactaagtgcttccacgtcttctgcttcgagtgcgtcaaaaca
cgctacgacacacgccagaggaagtgccccaaatgcaacgccgccttcggagccaacgac
ttccatcgcatttacatcggctaa
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