Hippoglossus stenolepis (Pacific halibut): 118111870
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Entry
118111870 CDS
T08308
Symbol
rapgef2b
Name
(RefSeq) rap guanine nucleotide exchange factor 2 isoform X2
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04010
MAPK signaling pathway
hsp04517
IgSF CAM signaling
hsp04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118111870 (rapgef2b)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
118111870 (rapgef2b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
118111870 (rapgef2b)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
PDZ
RA
cNMP_binding
PDZ_6
RA_2
PDZ_2
ABhydrolase-like_N
Motif
Other DBs
NCBI-GeneID:
118111870
NCBI-ProteinID:
XP_035016499
LinkDB
All DBs
Position
7:23361954..23460595
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AA seq
1654 aa
AA seq
DB search
MASYVDNSFRQAVMMNPAERTQQDLEIVYSYLHGMEALSNLREHQLRIMCETVRYERHEA
NEVLYYPDDIGSCWYILLSGSVFIKESMFLPRSSFGKRSAGSVRRGCECIVLEPSEMIVV
DYMDENEEYFQRQASHRQSRRRFRKINQKGERQTIIDTVDPYPTGKPPIARGYHTECNKP
QLPADFSRLHLADGLHPQVTHVSSSHSGCSITSDSGSSSLSDIYQATENEPGDMDLSGLP
ETAVDSEEDDDEEDIERASDPLMSRDIVRDCLEKDPMDRTDDDIEQLLEFMHQLPAFANM
TMSVRRELCAVMVFAVVERAGTIVLNDGEELDSWSVILNGSVEVTYPDSRTEILCMGNSF
GVSPTMEKEYMKGVMKTKVDDCQFVCIAQQDYCCILNQVEKNMQKVEEEGEIVMVKEHRE
LDRTGTRKGHIVIKGTPERLTMHLVEEHSVVDPTYIEDFLLTYRTFLSSPMVVGKKLLEW
FHDPSLRDKVTRVVLLWVNNHFNDFEGDPAMTHFLEEFEGNLEKEKMCGHLRLLNIACAA
KAKPRLVTLTKPSRDSPLAFSLLGGQEKGFRVFIDAVESGSKAAEVGLKRGDQILEVNGQ
NFENVQLNKANEILKNNTHLSITVKTNLLVFKDLLTRPEQDHDLDGEEEHDRKNGAPHLP
KIGDIKKASRYSIPDLAVDVEQVMGLEKVSKKAKTNSVGGRNKLKKMFDKTLTSILPPKP
YNEVCVGQSQDDSIVGMKQSKQIAPALPVSGNLSSSNPDLLQSHHRILDFNNQPVPVIPN
LSDQVLRVFKADQQSRYIMIGKDTTAKEVVAQAIREFALTAAAEAYSLCEVSVTPEGVIK
QRRLPDQLSKLADRIQLSGRYYLKSNMETETLCSDDDAQDLLREGQISLLQLSTVEVATQ
LSMRAFELFCAIEPTEYIDDLFKRRSKTGSFSLKRFEEAINDETFWVATEVTREPNQLKR
MKNVKHFIKIALHCRECKNFNSMFAIISGLNLAPVSRLRGTWEKLPSKYEKLFGDLQDLF
DPSRNMAKYRNVLNNQNLQPPIIPLFPVIKKDLTFLHEGNDSKVDGLVNFEKLRMIAKEI
RHVGRMASVNMDPALMFRTRKKKWRSLGSLSQGSANAAVLDVTQTGGHKKRVRRSSFLNA
KKLYEDAQMARKVKQYLSNLSLEVNEESLQTLSMQCEPSISTLPKNAGGKRPDTSPVVSR
AASQQRGQLTKGNQALQVPAVALYPSRKKVPVKDLPPFGTSSPQSLKKILSLSEEASDRH
RRQPEDTVSNASSQLSSPPTSPQSSPKKGYNRMGDAYSDSGHSEISSRSSLVSNSSFDMA
QEERRLRHSGGVGESHIVGARLERRATTDPDQYSLGSYSSMQDCRGIYAGCPTVLSSPSS
EELTQDQGDRVSLDAADSGRGSWTSCSSGSHDNIQTMQQGRSWETLAFGGGGGGIVGLPP
GGPEAFLGGPAALWAAQARGSWASASSSSSSAAYWGEDSEGDTGTIKRRGGKDVNADPET
SSITSTGSEEAKQHGRPSPSPITAGGKGLISRKEGRYREPPPTPPGYTALTITDLAEGQH
PAPSVPTTTAIHSGRRPPDYTTALQRSRMVTQSPDSHQAQQGAKQRSGGLHRTCSPAEDQ
KRDEEEEGESLSPKLVALRKPKRVAQHTPETPRP
NT seq
4965 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttatgtggataacagctttcgccaggctgtgatgatgaacccggcggaacgg
acgcaacaggacctggagatcgtctactcgtacctccacgggatggaggccctgtccaac
ctgcgagagcaccagctgaggataatgtgtgagacggttcgttatgagagacacgaggcc
aacgaggtgctatactaccctgacgacattggaagctgctggtacatcctgttgtccggc
tccgtcttcattaaggagtccatgttcctgcccagaagcagttttggaaagcgatcagca
ggcagcgtacgacgcggatgtgagtgcatcgtcctggaaccctcagagatgattgtggtg
gactatatggatgaaaatgaggagtactttcagcggcaggcatcgcacagacaatcccgt
cggcgctttcggaagatcaaccagaagggggagaggcagacaatcattgacacagtggat
ccgtaccccaccgggaagccgcccatagcccggggataccacacggaatgcaataaacct
cagctccccgcagacttcagccgacttcacctggccgacggcttgcacccacaggtgacc
cacgtctcctccagccactcaggatgtagtatcaccagcgactctggaagcagcagcctg
tcagacatttaccaggccacagagaacgaacccggtgacatggacctgagtggcctgccg
gagaccgctgtggactccgaggaggacgacgatgaggaggatatcgagcgagcgtcggac
cccctcatgagccgggacattgtgcgtgactgcctggagaaggacccgatggacagaacc
gatgatgacatagagcaattactggagttcatgcatcaactgccagcgtttgcaaacatg
accatgtcagtgaggagggaactctgcgccgtcatggtttttgctgtggtggaacgcgcc
ggcaccatcgttctcaacgatggagaggagttggattcctggtcggtgattctcaacggt
tcggtggaagtgacgtatcccgacagccggacggagatcctgtgtatggggaacagcttt
ggggtgtcaccgaccatggagaaggaatacatgaagggtgtgatgaagaccaaggtggac
gactgccagtttgtgtgcatagcccagcaggactactgctgcatcctcaaccaggtggag
aagaacatgcagaaggtcgaggaggaaggtgagatcgtcatggtgaaggaacaccgcgag
ctggatcgcaccggcaccaggaaaggacacatcgtaatcaagggcacgccggagcgtctc
accatgcacctagtggaggagcactcggtggtggaccccacgtacatcgaggacttcctg
ttgacctacaggaccttcctctccagccccatggtcgtgggcaagaagctcctggagtgg
ttccatgaccccagtctcagggacaaggttacacgggtagtcttgctgtgggtaaacaat
cacttcaatgactttgagggtgaccctgccatgactcactttctggaggagtttgaagga
aatctggagaaagaaaaaatgtgtgggcacctcagactgttaaatatagcatgtgctgct
aaagccaagccgcggctggtgacactgaccaagccgtccagggactctcctctggcgttc
agcctgctcggaggtcaggagaaaggttttcgcgtctttatcgatgccgtggagtccggg
agcaaagctgcagaagtcggccttaagcgtggagatcagatcttagaggtcaatgggcag
aactttgagaacgtccagctcaacaaagccaacgagatcctgaagaacaacacacacttg
tccataactgtgaaaacaaacctcttagtgtttaaagatcttctaacgaggcctgaacag
gaccacgacctggacggcgaggaggagcacgacaggaagaacggggcgccacacctcccg
aagatcggagacatcaagaaggccagccgctactccatccccgacctggcggtggacgtg
gagcaggtgatgggcctggagaaggtcagcaagaaggcgaagaccaactcggtgggagga
cgcaacaagctgaagaagatgtttgacaagacgctcaccagcatcctgcctcccaaacca
tacaatgaggtttgcgtgggccaatcgcaggacgacagcatcgtggggatgaaacagtcc
aaacagatcgcaccagctctgcccgtcagtggaaacctgtcgtcgtcaaaccccgacctg
ctgcagtcgcaccaccgcatcctcgacttcaacaaccagccagttccagttataccgaat
ttgtcagaccaggtattacgagtcttcaaggccgaccagcagtctcggtacatcatgatc
gggaaggacacgacggcgaaggaggtggtggcccaggctatcagggagtttgccctgacg
gcagcagcggaggcttattcgctgtgcgaggtgtccgtcacgccggagggcgtcatcaag
cagaggcgattaccagaccagctttctaaactcgccgacaggattcagctcagcggcaga
tactacctgaagagcaacatggagacggagacgttatgttcagacgacgacgcccaggac
ctccttagggaaggccagatctctctgttacagctcagcacggtggaggtggccactcag
ctctcgatgcgggcttttgaacttttctgtgccatcgagcccaccgagtacatcgacgac
ctgttcaagcggcgctcgaagacgggctcgttcagcctgaagcgcttcgaggaggccatc
aatgacgagaccttctgggtggccacggaggtgacgcgggagcccaaccagctcaaacgc
atgaagaacgtcaagcacttcatcaagatcgccctgcactgccgcgagtgcaagaacttc
aactccatgtttgccatcatcagtggtctgaacctggctccggtctccagactgaggggg
acgtgggaaaagctaccaagcaagtatgagaagctgttcggggacctgcaggaccttttc
gatccttccagaaacatggccaagtacaggaatgtgctcaacaatcaaaacctccagcca
ccaatcatccccttgttccccgtcatcaagaaggacctcaccttcttacacgaaggcaat
gactctaaagtggacgggctggtgaacttcgagaagctgaggatgatcgccaaagaaatc
cgccatgttggtcgcatggcgtccgtcaacatggacccggccctcatgttccggacaagg
aagaagaagtggagaagtttaggctctctaagccagggtagtgccaatgcagcggtgctg
gacgtcacgcagacgggcgggcacaagaagcgggtgcgtcgcagctccttcctgaacgcc
aaaaagctttacgaggacgcccagatggccaggaaggtcaagcagtacttgtccaacctc
agcctggaggtcaacgaggagagtctgcagacgctctcgatgcagtgtgaaccctccatc
agtacgctgcccaagaacgccggtgggaaacgaccagacacgtccccggtcgtgtctaga
gctgccagtcaacagagggggcagttgaccaaaggaaatcaggctctccaggtccctgcc
gtggcactttacccatcccgaaagaaggttccagtcaaagatctgccgcctttcggcacc
agttctccgcaatctctgaagaagatcctgtcgctgtcggaggaggcgagcgacagacac
cggaggcagccagaggacacagtgtccaacgcctcctcccagctctcctcccctcccacc
tccccccagagctcgcccaagaagggttacaaccggatgggcgacgcctactcagactct
ggtcacagtgagatctcgtctcgctccagcctcgtcagtaactcgtctttcgacatggcc
caggaggagaggaggctccgtcactccggaggagtcggggagtctcacatcgtgggagcg
cggctggaacgaagagccaccactgaccccgaccagtacagccttgggtcatattcctcg
atgcaggactgtcggggtatttacgccggctgcccgacggtgctctcttcgccgagctca
gaggagctcactcaggatcagggcgaccgtgtttcactcgacgctgcagacagcggccgc
ggctcctggacttcgtgctcctccggctcccacgacaacatccaaacaatgcagcagggg
cgcagctgggagactctggccttcggtggaggcggaggtggaatcgtggggctccctccc
ggcggaccagaggccttcttgggaggacctgcagcactgtgggcggcgcaggccaggggg
agctgggcgtctgccagctcctcgtcatcctccgccgcgtactggggagaggactctgag
ggcgacaccggcaccatcaagagaagaggagggaaggacgtcaatgctgacccagaaacg
agtagcatcacatccaccgggtcagaggaggccaagcagcacggccgtccgtctccatca
cccatcaccgctgggggtaaaggcctcatttcacgaaaagaaggccgataccgtgagcct
ccccctaccccccctggctacacggccctgacgatcaccgacctcgcggagggtcagcat
ccggctccgtctgtccccacgaccacagcgatccactcaggccgccggccacccgactac
accacggctctgcagcgctcgcgtatggtcacccagtcccccgactcccaccaggcccaa
cagggggcaaaacagcggtcgggcggcctccaccgcacctgctcgccagccgaggaccaa
aagcgcgatgaggaagaggagggtgagtccttgtctcccaaactagtcgctctgaggaag
ccaaagcgagtggcacagcacacacctgagactcccagaccatga
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