Hippoglossus stenolepis (Pacific halibut): 118111883
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Entry
118111883 CDS
T08308
Symbol
stag2b
Name
(RefSeq) cohesin subunit SA-2
KO
K06671
cohesin complex subunit SA-1/2
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
118111883 (stag2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsp03036
]
118111883 (stag2b)
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
118111883 (stag2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
AdoHcyase_NAD
Motif
Other DBs
NCBI-GeneID:
118111883
NCBI-ProteinID:
XP_035016537
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Position
7:complement(8983140..9008129)
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AA seq
1273 aa
AA seq
DB search
MIAAPEIPSEFSFTHDTDTRFSSDTDFSEEPDGRVAISAKGKGGKKGKKAAGEKGKGGKG
AGRLNGHHQENGMENMMLFEVVKMGRSAMQSVVDDWIESYKHDRDVALLDLINFFIQCSG
CKGVVSGEMFRNMQNSEIIRRMTEEFDEDSGDYPLTIAGPQWKKFKSSFCEFIAVLVRQC
QYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSINMDNTQR
QYEAERNKAVPKRANDRLELLLQKRKELQENQDEIENMMNAIFKGVFVHRYRDSIAEIRA
ICIEEIGVWMKLYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNRELNARLEL
FTSRFKDRIVSMTLDKEYDVAVQAIKLLTLVLNSTDEVLTPEDCESVYHLVYSAHRPVAI
AAGEFLFKKLFSQREPEEEGAPKRRGRQSPNANLIKTTVFFFLESELHEHAAYLVDSLWE
CGPELLKDWECMISLLLDEPLPGEEALTDRQETALIEIMLCTVRQAAECHPPVGRGTGKR
VMTAKEKKTQLDDRTRMTELFAVALPPLLAKYAVDSEKVTNLLQLPQFFDLEIYTTGRLE
KHLESLMRQVREIVEKHTDTEVLEVCSKTYHALCNEEFTIFNRVDIARSQLLDEQVDKFN
RLLEDFLQEGEEVDEDDAYQVLSTLKRITAFHNAHDLSGWDLFTSNFKLLNTGIENGDMP
EQIVIHSLQCTHYVILWNLAKISEGSSRKDDMVTLRKQMRAFCMMCQRYLTNVNTAVKEQ
AFTILCDLLLIFSHQMVSGGREHLEPLVYSSEDSLQSELLSFILNHVFIDQDDDTNSTDG
QQDDEAVKIEALHKRRNLLAAYCKLIIYCVVDMKTGADIFKQYMRYYNDYGDIIKETMSK
TRQIDKIQCAKTLILSLQQLFNEMLSELGHGFDRSSSAFCGIKELARRFSLTFGLDQVKT
RDAIAMLHKDGIEFSFKDPSPQGEGGPPLNLAFLDILSEFSSKLMRQDKRTVHMYLERFM
TFQMALQREDCWLPLISYRNSLQAGGDDDTMSVMSGYSSRGSSIRSKKSKPPSVTAGTSA
AKRKLPEEESSSSSEVWQQTLQTPVMLPSPHLTSTAMRDPKRGRDDSFMGVYPLPHDQQQ
PHQLPQHHQQTPQHHQTPMDYNSQVTWMLAQRQQEEARQQQERAMNYAKLRTNLQHAIRR
GTGLMEEDEEPIVEDVMMSSEGRLDDLNEGMDFDTMDIDLPPSKNRRERSELKPDYFDPA
SIMDESVLGVSMF
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atgatagcagcaccagaaataccatcagagttctcctttactcacgacacagacactcga
ttctcttcggacacagacttctccgaggagcctgatggaagagttgcgatctcagcgaaa
ggaaagggtgggaagaaggggaagaaggccgccggggagaaaggcaaaggagggaaggga
gcaggccggttaaatggccaccaccaagagaatggcatggaaaacatgatgctgtttgag
gtggtgaagatgggcaggagtgcaatgcagtctgtcgttgatgactggattgagtcgtac
aaacatgacagagacgttgcgctactagatctcatcaatttcttcatccaatgctcagga
tgtaaaggtgtggtcagtggagaaatgttccgcaacatgcagaactctgagatcatccga
cgaatgacagaggaatttgatgaggacagcggtgactacccattgaccatagcagggccc
caatggaagaagttcaaatcaagcttttgtgaattcatcgctgtgctagtgcgtcagtgt
caatacagtatcatctatgatgagtacatgatggacacagtcatctctcttctcaccgga
ctatcggactcgcaggtccgagccttcagacacacctcaacactggcagccatgaagctg
atgacagccctggtgaatgtagctctaaacctcagcatcaacatggacaacacccagcgc
cagtatgaggcagagaggaataaagcggtgcccaaaagggccaacgacagactagagctg
ctcctgcagaaacgcaaagagctccaagaaaatcaggatgagattgaaaacatgatgaat
gcaatattcaaaggagtgtttgttcacagatatcgcgactcaatagcagaaatccgggca
atctgtatagaagagattggagtgtggatgaaactctatagcgatgccttcctcaacgac
agctatctgaagtatgtgggatggacaatgcacgataagcaaggtgaggtacgtctgaag
tgtctgacagccctgcagggtctctactacaacagagagctcaatgcaagattggaactc
ttcaccagtcgcttcaaggaccgaatcgtctccatgactctggacaaagagtatgatgtt
gctgtacaagcaattaaactactcactctagtcttgaatagtacggatgaggtattgacc
cctgaggactgtgagagtgtctatcacttggtctactcagcacacaggcctgtcgccatt
gcagctggagaattcctctttaagaaattgttcagccaaagggaaccggaggaggaaggt
gcccccaagagaagaggcagacaaagccccaacgccaacctcattaagaccactgtcttc
ttcttcctggagagtgagctccacgagcatgcagcctacctagtggactccctctgggaa
tgcggtccagagctactgaaggactgggagtgtatgatcagcctgctgctagatgaacca
ttaccaggagaggaagctcttacagacagacaagagacagccttgattgaaattatgctg
tgcactgtgcgccaggctgctgaatgccacccgcccgttggaagaggaacaggaaagagg
gtaatgactgctaaggagaagaagactcagctggatgacagaaccagaatgacggagctg
tttgctgtggctttgccccctctactggccaagtatgctgtggattcagagaaggtgacc
aacttgttgcagctgcctcagttctttgatctggaaatttataccacgggacgtctggag
aagcatctggagtccctgatgcgtcaggtcagagaaatagtggagaagcacacagacact
gaagtcttggaggtttgctccaagacttaccacgccctctgcaacgaggagttcacaatc
tttaacagggtggacatcgcccgctcccagttgctggatgaacaggtcgacaagttcaac
aggctactggaggattttctacaagagggggaagaggtcgatgaagatgatgcatatcag
gttttgtcaactctaaagaggatcacagcatttcacaatgcacacgacctgtcggggtgg
gacctttttaccagtaacttcaagctcctcaacacaggcatagagaatggagacatgcct
gagcagatagtcatccattcgctgcagtgcacccactacgtgatcttgtggaatctggct
aagatatctgagggtagctccaggaaggatgacatggtgaccctgaggaagcagatgagg
gcattctgtatgatgtgtcagcgctacctcaccaatgtcaacacagctgtcaaagaacag
gcattcaccatcctgtgtgatctcttgctcatcttcagccaccagatggtgtccggaggc
agagaacacctggagcccctcgtctattcctcggaggactcgctgcagtctgaacttctc
tccttcatcctgaaccatgtcttcatagatcaggacgacgacacaaatagcacagatggg
caacaggatgatgaggctgtaaaaattgaagctctgcacaagaggagaaacctcctggct
gcctactgtaaactgatcatctactgtgtagtagacatgaagactggtgctgacatcttc
aaacagtacatgcgatattacaatgattatggtgacatcatcaaggagactatgagtaag
actcgacaaatcgacaagattcaatgtgccaagacgcttatcctcagtctgcagcagctc
ttcaatgaaatgctgtcagaactgggtcatgggtttgatcgttcctcttctgcgttctgt
ggaattaaagagttggcacgtcgtttttctctaacctttggtctcgaccaagtcaaaacc
agagatgccatcgctatgctacacaaggatggtattgagttttcgtttaaggatcccagt
ccccagggagaaggaggccctcccctcaacctggctttcttagacatcctcagcgagttc
tcctccaaacttatgagacaagacaagaggactgtccacatgtacctggagcgcttcatg
acattccagatggcgctgcagcgagaggactgctggctccccctcatctcctacaggaat
tccctgcaggctggtggtgatgacgacaccatgtcggtgatgagtggctactccagcaga
ggctcctccattcgctccaagaagtccaagcctccttctgttacagccggaacgtcagca
gccaagaggaaactgccagaagaggagagcagcagcagcagtgaggtttggcagcagacc
ctgcagaccccagtcatgctcccgtcgccgcacctcacctccactgccatgcgtgacccg
aagaggggccgtgatgacagcttcatgggggtctaccccctccctcacgaccagcagcag
ccgcaccaactaccgcagcatcatcaacagacgcctcagcaccaccagacacccatggat
tacaattcccaggtgacgtggatgctggctcagagacagcaagaagaggcgcgccagcag
caggaaagagccatgaactatgccaagctccgaaccaacctgcagcacgctattcgtcgc
ggcactgggctcatggaggaggatgaagagccgattgtggaggatgtgatgatgtcatct
gagggtcgtttggatgacctcaatgaaggcatggacttcgacaccatggacattgatttg
ccaccctccaagaaccgtcgtgagagatctgagctcaagccagactactttgaccctgcc
tctattatggatgagtcggttcttggggtgtccatgttttaa
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