Hippoglossus stenolepis (Pacific halibut): 118111902
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Entry
118111902 CDS
T08308
Symbol
gabrb2a
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-2a
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04080
Neuroactive ligand-receptor interaction
hsp04082
Neuroactive ligand signaling
hsp04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118111902 (gabrb2a)
04082 Neuroactive ligand signaling
118111902 (gabrb2a)
04519 Cadherin signaling
118111902 (gabrb2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsp04040
]
118111902 (gabrb2a)
Ion channels [BR:
hsp04040
]
Ligand-gated channels
GABA-A
118111902 (gabrb2a)
SSDB
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Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
OAD_gamma
Motif
Other DBs
NCBI-GeneID:
118111902
NCBI-ProteinID:
XP_035016575
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Position
7:12722772..12754888
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AA seq
564 aa
AA seq
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MLGWLHACAPHWLLCAVWSKLDVRSPHSHPETASKTVAMGRIRKNHFGILTFSLLVTFVW
AQSAKDLKDPSNMPLVKETVDRLMKGYDIRLRPDFGGAPVAVGMNIDIASIDMVSEVNMD
YTLTMYFQQAWRDKRLSYSEIAYNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMI
RLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDGAVS
GVDRIELPQFSIVDYKLISKNVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILS
WVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLAL
LEYAFVNYIFFGQGPQRQKKAAEKAATANNEKLRPDPNKWLVGNVVQRDDALYARMKQRE
IDAYDSMWDPIFVDDAALGLGEQRNKMAPDDNILFSSLEMKNEMGGAGDLSRGLGAPGDP
RNTMLAYDSSTLQYRRAAMARQNYGHSALERHAQKKSRLRRRASQLKVNIPDLSDVNSID
KWSRMIFPTVFSFFNVVYWLYYVH
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgttgggctggctgcacgcatgcgcccctcattggctcctctgcgctgtctggagtaag
ttggatgtgcgctctcctcactcgcatcccgaaaccgcctcaaaaactgttgcgatgggg
aggatcaggaaaaaccactttgggattttgactttttccttgctagtgactttcgtctgg
gctcaaagcgcgaaggatctcaaagatccgagcaatatgccgctggtcaaagaaacagtg
gacagactgatgaaaggatacgacattcggttgaggccagatttcggaggtgcgccggtg
gctgtggggatgaatattgacatagccagcatagacatggtctctgaagtcaatatggac
tacaccttgacgatgtacttccagcaagcatggcgggacaagcgtctgtcctactctgag
atcgcctacaacctgactctggataacagagtggcggatcagctgtgggtccccgacacc
tacttccttaacgacaagaagtccttcgtccacggggtcacggtcaagaacaggatgatc
cgtctccaccctgacggcacggtgctttacggactcaggatcaccaccactgcagcctgc
atgatggacctgcgtcgctaccctctagacgagcaaaactgcaccctggagatcgaaagc
tatggctacaccacagatgatattgagttttattggcgcggtggagacggagcggtgtcc
ggagtcgacagaatagagctgcctcagttttctatcgtcgactataaactcatctcaaag
aacgtggtcttctctacaggttcctacccccgcctgtccctcagcttcaaactgaagagg
aacattggttacttcatcctgcagacatacatgccttccatcctgattaccatcctctcc
tgggtctccttctggatcaactacgatgcctcagctgccagagtggccctggggatcact
acggtgctgaccatgaccaccatcaacacccacttgcgagagacgcttccaaagatcccc
tacgtgaaggctattgacatgtacctgatgggctgctttgtgtttgtcttcctggccctg
ctggagtacgctttcgtcaactacatcttcttcggccagggcccccagcggcagaagaag
gcggctgagaaagcggccacagccaataacgagaagctgagacccgaccccaacaagtgg
ctggtgggaaatgtagttcagagagatgatgctctgtatgccagaatgaaacagagggaa
attgacgcatatgactcgatgtgggatcccatctttgtggacgatgccgcattaggacta
ggcgagcaaagaaataagatggctcctgatgacaacatcctgttcagcagcttggaaatg
aagaatgagatgggtggtgccggggatctgtcccggggcctgggagcacccggcgacccc
cgcaacaccatgctggcctatgatagctcgacgctgcagtaccgcagggcagccatggcc
cgccaaaactatggccacagcgccttggagcgccacgcccagaagaagtctcgcctacgg
agacgggcctcccagctcaaggtgaacatcccagacctgtccgacgtgaactctattgac
aagtggtccaggatgatcttccccaccgtcttctccttcttcaacgtggtctactggctc
tactacgtccattaa
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