Hippoglossus stenolepis (Pacific halibut): 118111904
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Entry
118111904 CDS
T08308
Symbol
gabra6a
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6a
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04080
Neuroactive ligand-receptor interaction
hsp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118111904 (gabra6a)
04082 Neuroactive ligand signaling
118111904 (gabra6a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsp04040
]
118111904 (gabra6a)
Ion channels [BR:
hsp04040
]
Ligand-gated channels
GABA-A
118111904 (gabra6a)
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
118111904
NCBI-ProteinID:
XP_035016577
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All DBs
Position
7:12714115..12722597
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AA seq
450 aa
AA seq
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MRPRMAVLTLPLVTFLCWMSLGSVSANEKIYSENITRILDRLLDGYDNRLRPGSGGGLTE
VKTDIFVTSFGPVSDVDMEYTMDMFFRQMWVDERLKFEGPYEILRLNNRMVDKIWTPDTF
FRNSKKSISHNMTTPNKLFRIMQNGTVLYTMRLTISAECPMSLINFPMDGHACPLRFGSY
AYTRSEIIFTWKKGPVASVDCPKESMSLLQYDLVGQTLSSEIFKSNTGHYSVQVIHFHLQ
RKLGYYLIQTYIPLIMVVVLSQVSFWINKESVPARTVAGITTVLTMTTLSISARQSLPKV
AYATAMDWFIAVCFAFVASALVEFAAVNYFATLQANRLKRRKARQDKLEVLATGSDDDDT
VSSDSSPREGLKRRNHSVCRSEPGEAPPVPIFLQQGSAFPQIPQLAGTSPIDKHARILFP
LTFALFNLVYWFIYLGQDNMESARDMDLKN
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcgacccaggatggctgttctgacattgcctttggttacttttctctgctggatgagc
cttggtagtgtaagtgcaaatgagaagatttactcagaaaacatcactcgcattttggat
cgacttttggatggctatgacaacagactgcgtcctggatctggaggtggtttaacagag
gtgaagacagacatctttgtcaccagcttcgggcctgtttcagatgttgacatggagtac
acgatggacatgttcttccgccagatgtgggttgatgagcgtttgaagttcgagggcccc
tatgagatcctgcggctgaacaatcgcatggtggacaagatctggactcctgatactttt
ttcagaaactccaaaaagtccatttcccataacatgaccacaccgaacaagctcttccgc
atcatgcagaatgggactgtcctctacacaatgagactgacaatcagcgcggagtgtccg
atgagtctgatcaacttccccatggacggccacgcctgtcctctaagatttgggagctat
gcctacacgaggagtgagataattttcacctggaagaaggggccagtagcatctgtcgat
tgtcccaaagagtccatgagtcttctgcagtacgaccttgtgggacagactttgtccagt
gagatattcaaatcaaatacaggtcactactctgtgcaggtgatccatttccacctccag
aggaagctcggttactacctcatacagacctacatccccctcataatggttgttgtgttg
tcacaagtctctttttggattaacaaggagtccgtcccggcacgtacagtggctggcatc
accacagtgctgaccatgaccaccttgagcattagcgcccgtcagtcacttcccaaagtg
gcctacgccaccgccatggattggttcattgctgtgtgctttgccttcgtggcatcggct
ctggtggagtttgcggcagtaaactactttgccacgctgcaggccaatcgtctgaagaga
cgaaaagccagacaagacaagctggaggtgttggcgaccggcagcgacgatgacgacaca
gtttcttcggacagcagccctcgggaaggcctgaagaggagaaaccactcagtgtgccgc
agtgagccgggagaagctccgccagtgcccatctttctccagcagggctcagcttttcct
cagatcccgcagttggccggcaccagccccatcgacaagcacgcccgtatcctcttcccc
ctgacattcgccctcttcaacctcgtctactggttcatctacctgggccaagacaacatg
gagagtgccagagacatggatcttaaaaactga
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