Hippoglossus stenolepis (Pacific halibut): 118111984
Help
Entry
118111984 CDS
T08308
Symbol
lrit3a
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3a
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hsp04990
]
118111984 (lrit3a)
Domain-containing proteins not elsewhere classified [BR:
hsp04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
118111984 (lrit3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
Ig_2
LRR_1
ig
fn3
LRR_14
LRR_5
Motif
Other DBs
NCBI-GeneID:
118111984
NCBI-ProteinID:
XP_035016783
LinkDB
All DBs
Position
7:complement(22730452..22736750)
Genome browser
AA seq
640 aa
AA seq
DB search
MRRLLCVHVFLCCLSMAHPFCPSQCTCVFHGRNDGIGTRSVLCNDPDMSDIPVNVPVDTV
KLRIEKTAVRRVPTEAFYYLSDLRYLWITYNSINSVDTGSFYNLKVLHELRLDGNMISMF
PWESLKEMPRLRTLDLHNNRLTNVPTEAIPFLLNITYLDLSSNKLATLPSNLMDIWPPFN
GAPISTNSSQKIVLGLQDNPWYCDCKISKLIEISKMTDSPVVLMDLFLTCSAPENLAGVL
FQRAELDNCVKPIVMTSATKITSYLGSNVLLRCDATGTPTPNLYWARSEGSPVNNTVQES
PGEGIKWSIMSLHGILPKDAGNYSCKATNVAGSAEATISLSVAGTISTTVPPVRQSTATA
PTSQGTTLTPTTEISASTIVTSTVPPRTTPTQPTVPKKPKTTPSNGLQKGSLKQTKNQQG
ENGRKLAADEKSKKSDASKSVKDLKIVEETADSAVLLWTADGLPNDAPLTVVYSPYGEDD
TKRTEETNAGSGKVLLEGLSSGMRYSVCLIAKGSDAGKDPCIDFYTLEIVEDGGQNQLFM
IISGIACALILPLIALLLYKILALYWKGRDPALDEEELEKESYVKFETISMKQRTLNSHP
TEFWARRATHDSERMLLCSRSSIDSQMTYKSDSSRSEYLC
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcgacttctctgcgtgcacgtattcctatgctgcctcagtatggctcatcccttc
tgtccgtcgcagtgcacctgtgtcttccatggacgtaatgatggaataggaaccagatct
gtgctctgcaatgacccagacatgtctgatatccctgtcaacgttccagtggatacggtt
aaacttcgcattgagaaaaccgctgtacgccgagtcccaacagaagctttttactacctg
tcggatctgcggtacctgtggattacttacaattccataaactcagtggatactggaagt
ttttacaacctcaaagtgctccacgaactcaggctggatggaaatatgatctccatgttc
ccctgggagtctctaaaagagatgccaaggctgcggacactggatctgcacaacaacaga
ctcaccaatgttcccactgaggctatccccttcctcctcaacatcacctacttggattta
tccagcaataaattagcaaccctgccctctaacctcatggatatctggcctcccttcaat
ggagcccccatttctacgaactcctcgcagaaaatcgtgttaggtctccaagataatccc
tggtactgtgactgtaaaatctccaagcttatagagatttccaaaatgacagacagccca
gtggtgttaatggacttgttcctgacctgcagtgcaccggagaatctggctggggtcctt
tttcaacgtgctgaacttgacaattgtgtaaaacctatagtcatgacctctgcaaccaag
atcacatcttatctgggcagcaacgttctcctgcgatgtgatgccacagggacgccaaca
ccaaatctgtactgggctagatcagaaggctcaccagttaacaacacagttcaggagtca
cctggagagggcatcaagtggtccatcatgagtttgcatggaatattgcccaaagacgct
gggaactacagctgcaaagctacgaatgttgctggcagcgcagaagccactatttctctc
tcagttgctggtaccatcagtaccacggtgccgccagtgaggcaaagcacggcgactgca
ccgaccagccaaggcacaacactgactcccactacagaaatatctgcctcaactattgta
acatctacagttcctccgagaacaacaccaacccaacctactgtacccaagaagccgaaa
actacccccagcaatggtttacagaaaggctcactcaaacaaacgaagaaccagcaagga
gagaacgggaggaagctcgcagcagatgaaaaaagcaagaaaagcgacgcatcgaagtcc
gtcaaggacctgaagattgtagaggagacagctgacagtgcagtgttgctctggacagca
gatgggttaccaaacgatgccccactaacagttgtatattccccctatggtgaggatgac
accaaaaggacagaagaaactaatgctggcagtggaaaagtccttcttgagggtctttcc
tctgggatgaggtactcagtttgcctcatagcaaaaggtagtgatgcaggaaaggatccg
tgcattgacttctacacactggagattgtagaggatggtggtcagaaccagctcttcatg
attataagcggcattgcctgtgctttgattttgcctctcattgccctgttgctctacaag
atcctcgctctctactggaaagggcgtgacccagctctggatgaggaggagctggaaaaa
gagagctatgtcaagttcgagacgatttcaatgaaacaacgaactctgaactctcatccc
actgagttttgggcaaggagagcaacccatgactcagagcgcatgctcctttgctccagg
tcgagcatagactctcagatgacctataagagtgacagttcccggtctgagtatctctgc
tga
DBGET
integrated database retrieval system
