Hippoglossus stenolepis (Pacific halibut): 118111993
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Entry
118111993 CDS
T08308
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04120
Ubiquitin mediated proteolysis
hsp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118111993 (syvn1)
04120 Ubiquitin mediated proteolysis
118111993 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsp04121
]
118111993 (syvn1)
Enzymes [BR:
hsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118111993 (syvn1)
Ubiquitin system [BR:
hsp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118111993 (syvn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
zf-HC5HC2H
zf-Nse
FANCL_C
Motif
Other DBs
NCBI-GeneID:
118111993
NCBI-ProteinID:
XP_035016794
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All DBs
Position
7:complement(7269852..7279339)
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AA seq
637 aa
AA seq
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MVRATLVTATSLALTGAVVAHAYLLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISCVFHLRVLSLIGLLGVLDFLFVHHACQSIITRGASVQLVFGFEYAI
LLTMVLTTFIKYVLHTVDLQSENPWDNKAVYMLYTELFTGFIKVLLYIAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQASDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASNNNQTPAPAQAPPPAPAAPANAP
AAPPANVAPGMLPGFPPGIFPFWGPFPAVPPPPAAAAAADGPGATDAAQSSTEASGTSQP
SSSTGDTSTAAAAPGSAIPGFPFSFPPPPFPSAPWLPMPPPPPFVSSMPPPPPSLSRMSE
EELRELEAEGRQGLEARLQCLQNIHTLLDAAMLNIHHYLSTVATLTPPRAEGSTGEASGT
NHSASSAAAGSSTESQSQETDSGPSLDQVNGATVSSQAADSTSAASETESKENIDDEELL
EDAVEVEGGEPNAAELRRRRLRKLESASSSSSPPPDN
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggtacgagcaaccttggtgacggccaccagtctggctctgactggggctgtggtggca
cacgcttacctcctcaagcaccagttctacccgactgtggtctacctcaccaaaagcagc
cccagcatggcggtgttgtacatccaggcctttgtgctggtgtttctgctgggaaagttc
atgaggaaggtgttttttggtcagctaagagccgcggaaatggagcacctcatcgagcgc
tcctggtacgctgtcactgagacctgtctggccttcactgtgttcagggatgacttctcc
ccccgcttcgtcgccctcttcaccctcctcctcttccttaagtgcttccactggctggcc
gaggaccgggtagactttatggaacgaagtccaaacatctcctgtgtgtttcacttgaga
gtattgtctctcattggactgctgggtgtcctggacttcctgtttgtccaccatgcctgt
caaagcatcattaccagaggagcctcagtccagctggtttttggattcgagtatgccatc
ctgctgactatggtgctgacgaccttcatcaagtacgttctgcacaccgttgacctacag
agtgagaatccctgggacaataaggccgtctatatgctctatactgagctcttcacaggt
ttcatcaaagtgctgctgtacatcgctttcatgaccatcatgataaaggttcacaccttc
cctctgtttgccattcgccccatgtatctggccatgaggcaattcaagaaagctgtaaca
gatgctataatgtctcggagagccattcgcaacatgaacacactataccctgatgctact
cctgaagatctgcaggcttctgacaatgtttgtatcatctgtcgagaggaaatggtcact
ggagccaagaaactaccttgtaatcacattttccactccagctgcttgcgctcctggttc
cagcgccagcagacctgccccacctgtcgaatggacgtcctcagagcttccaataacaat
cagactcctgccccagcccaggccccgccccctgcccctgcagcccctgccaacgcaccc
gcagccccgcctgctaatgtggctccaggcatgttaccaggcttcccacctggcatcttc
cctttctggggtcccttccctgcagtgcctcctcctcctgctgccgcggctgcagctgac
ggtcctggtgctactgatgctgcccaaagcagcacagaggcatctggtaccagtcagcct
tcatcatctactggtgatacctccacagcagcagctgctccaggatcagcaatcccaggc
tttcccttctccttccctcctcctcccttcccctccgctccgtggctgcccatgccacca
cctcctccctttgtgtcctcaatgccgccacctcctccgtctctgtcccggatgtccgag
gaggagctccgggagctggaggctgaaggccggcagggcctcgaggccagactccagtgt
ctccaaaacatccacaccctgctggatgccgccatgctcaacatccaccactacctcagc
accgtcgccaccctcactccacctcgggctgaaggcagcacaggagaagccagtgggaca
aaccactctgcttcatctgctgcagctggcagcagcacagagagtcagagccaggagaca
gactcaggacccagcttggatcaagtgaatggtgctacagtctcctctcaggccgctgat
tccacctctgctgcctcggaaacggaaagtaaagaaaacattgatgatgaagagttgctg
gaggatgcggtggaggtcgagggcggagaaccgaacgctgccgagctgaggcgccgccgt
cttcgtaagttggagtcggcatcatcgtcgtcatcaccccctccagacaactga
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