Hippoglossus stenolepis (Pacific halibut): 118112060
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Entry
118112060 CDS
T08308
Symbol
canx
Name
(RefSeq) calnexin
KO
K08054
calnexin
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04141
Protein processing in endoplasmic reticulum
hsp04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118112060 (canx)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
118112060 (canx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
hsp03110
]
118112060 (canx)
04131 Membrane trafficking [BR:
hsp04131
]
118112060 (canx)
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
hsp04091
]
118112060 (canx)
Chaperones and folding catalysts [BR:
hsp03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
118112060 (canx)
Membrane trafficking [BR:
hsp04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
118112060 (canx)
Autophagy
ER-phagy
Other ER-phagy associated proteins
118112060 (canx)
Lectins [BR:
hsp04091
]
L-type lectins
118112060 (canx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
Connexin
PFF1_TM
FAM176
DUF6080
Piezo_TM1-24
DUF7261
MAP17
V_ATPase_I
SieB
DDHD
Motif
Other DBs
NCBI-GeneID:
118112060
NCBI-ProteinID:
XP_035016936
LinkDB
All DBs
Position
7:complement(27407248..27422364)
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AA seq
620 aa
AA seq
DB search
MDHRIGLLVLLAAGLLCLSLAPVSQAEHQVEDILDDDVDVEDELDLGLAGADEEELEGDV
QDEAPPAPTTPPAPKVTYKAPEPMGEHFFAESFDRGTLDGWVVSIAKKEDTDEDIAKYDG
KWAVEDMKDSKLPGDKGLVLKSRAKHHAISAQLLRPFTFDTQPLIIQYEVNFQAGIDCGG
AYVKLLTQTPDLDLDQFVDKTPYTIMFGPDKCGEDYKLHFIFRHKNPKTGEYEEKHAKKP
DSDLRTYYTDKKTHLYTLVLNPDNTFEVLVDQTVVNSGSLLTDVTPPVNPLAEIEDPDDQ
KPEDWDERPKIQDPDAVKPEDWDEDAPAQIPDEDAVKPDGWLDDEPEYIGDPEAVKPEDW
DVDMDGEWEAPQIPNSVCESAPGCGAWNRPMIDNPSYKGKWKPPMIDNPNYQGVWKPRKV
ANPEFFEDLHPFRMSPFNAVGLELWSMTSDIFFDNFFISNDRNTAERWATDGWGLKKAAE
GAADPGLATQMLNAAEERPWLWVVYVLTVALPLILIVIFCCTGKKKSAATPAEYKKTDEP
QPDVKEEEQEEEEQEEKAEEAEESSPAAEGKSDKEESPGEEDEAENDEAENDDAEDPTAD
EKLEDDVLRRSPRNKKVRKD
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggatcacaggattggcttattagttcttctggcggcaggcctcctctgcctcagtttg
gcccccgtatctcaggctgagcaccaggtcgaggacattctggatgatgacgtagacgtt
gaggacgagctggatctgggtttggccggagctgacgaggaggagctagagggggacgtt
caggatgaagctccacctgctcctacaactcctcccgcaccgaaggtgacctacaaagct
cctgagccgatgggggagcatttcttcgcggagtcttttgaccgagggacacttgacggc
tgggttgtgtccatagccaagaaggaagacaccgatgaagatatcgcaaaatatgatggt
aaatgggcggtggaggacatgaaggatagtaaactgcccggggacaaaggtcttgtactg
aagtccagagccaaacatcacgccatctcagcccagctgctgcgacctttcaccttcgat
acccagcccctcatcatccagtacgaggtgaacttccaggcagggattgattgtggcggc
gcctacgtcaaactgctgactcagactcctgatctcgacctggaccagtttgtggataaa
actccgtacaccatcatgtttggacctgacaaatgtggagaagattacaaacttcacttc
atcttcagacacaaaaaccccaaaactggagagtacgaagagaaacacgctaagaaacca
gattctgacctgaggacgtactataccgacaagaagacacacctgtacacactggtgttg
aaccctgacaacaccttcgaggtgctggtcgatcagacggttgtgaacagcggcagcctg
ctgacagatgtgaccccccctgtgaaccctctcgccgaaatcgaggacccggacgaccaa
aaacccgaggactgggacgagaggcccaagatccaggacccagacgcggtcaagcccgag
gactgggacgaggacgctcccgctcagattccagatgaagatgcagtgaagccagacggc
tggttggacgacgagccggagtacatcggagatcctgaagccgtcaaacctgaggactgg
gatgtggacatggacggtgaatgggaggctcctcagatccctaactccgtctgcgagtca
gcccccggctgtggcgcctggaatcgtccgatgatcgataaccccagctacaagggcaag
tggaagcccccaatgatcgacaaccccaactaccagggcgtctggaagccaaggaaggtc
gccaaccctgagttctttgaggacctgcacccgttcaggatgagtccgttcaacgctgtt
ggactcgagctctggtccatgacctccgacatcttctttgacaacttcttcatatccaac
gaccgcaacacagccgagcgctgggccaccgatggctgggggctgaagaaggcagcagag
ggcgctgctgatcctggtctggcaacgcagatgttgaacgctgcagaggagcgtccctgg
ctctgggtagtctacgtcctcactgtggctttaccgctcatcctcatcgttatcttctgc
tgcaccggcaagaagaagagtgcggcgacgccagcagaatacaagaagacggacgaacct
cagcctgatgtgaaggaggaggagcaggaagaggaggagcaggaagagaaggctgaagag
gcagaggagagcagtccagctgcagagggcaagagcgacaaagaggaaagtccgggagag
gaagacgaagctgagaatgacgaagctgagaatgatgatgctgaggaccccacagcagat
gagaagttagaggacgatgttctgcggagatctcccaggaacaagaaggtcagaaaagac
tga
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