Hippoglossus stenolepis (Pacific halibut): 118112103
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Entry
118112103 CDS
T08308
Symbol
fmr1
Name
(RefSeq) synaptic functional regulator FMR1
KO
K15516
fragile X mental retardation protein
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsp03019
]
118112103 (fmr1)
Messenger RNA biogenesis [BR:
hsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
118112103 (fmr1)
Factors involved in mRNA localization
Other mRNA localization factors
118112103 (fmr1)
mRNA cycle factors
Stress granule specific factors
118112103 (fmr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
Tudor_FRX1
FXMR_C2
KH_1
Agenet
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
118112103
NCBI-ProteinID:
XP_035017021
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All DBs
Position
7:6956599..6975085
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AA seq
606 aa
AA seq
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MDELVAEVRGTSGAFYKAFVKDVHEGSVTVAFENNWQPERQIPFQDVRFPPPTGFCKEIN
ESDEVEVYSRANDKEPCGWWLAKVRMVKGEFYVIEYAACDATLNEIVTLERLRPVNPNKP
ATKNTFIKIRLDVPEDLRQMCSKESAHKDFKKAVGAFTVTYDSEKKQLVILSVNEVTMKR
ANMMSDMHFRSLRTKLSLMTRNEEANRQLESSRQLASRFHEQFVVRDDLMGLAIGTHGAN
IQQARKVPGVTNIDLDEETCTFHIYGEDQEAVRLARCFLEFSEDVIKVPRNLVGKVIGKN
GKLIQEVVDKSGVVRVRIEPENDKKPSAVAAAAADEGMVPFVFVGTKESISNATVLLDYH
LNYLKEVDQLRLERLQIDEQLRQIGGGGGGGGTGPRNLKDKTYVFDNGMGLGMGRGAGGG
GKPYTGGGGRGGRGRRGGGAAFASGTNSEASNASETESDHREELSDWSLACTEELMTGGG
TLPRRTDGRKRPGGGGPRGRGGRGRGGGGYKGDDMQWGDPRPRHIRDPKTRAPEDSLQIR
VDGNNERSVQHSSGGRGGGGGGGGPSSSQGGVGSDGPSRHHHPRPIRDRGMKKDKQDAPP
LVNGVS
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggatgaactagtcgcggaagtgaggggaaccagcggggccttttataaggcctttgtg
aaggatgttcatgaaggatcagtcactgtggcttttgaaaacaactggcagccggagcgt
cagatcccattccaggatgtgcgatttcctcctccaacagggttctgcaaagagataaat
gagagcgatgaggtcgaggtatattccagggctaatgacaaagagccttgtgggtggtgg
ctggctaaggttcgcatggttaaaggagagttctacgtaatagaatatgctgcatgcgac
gctacattaaatgagattgtgacactggagaggttacggccagtcaacccaaacaaacca
gccacaaaaaacacattcatcaagatcagactggatgtacccgaggatctacgacagatg
tgctccaaggaatcggcacacaaagactttaagaaggctgtgggagcgttcactgtcacc
tatgactcagaaaaaaagcagctggtcatcctgtcagtgaatgaggtcacaatgaaacgc
gccaatatgatgagtgacatgcactttaggagcctccgcaccaaactgtctctcatgaca
aggaacgaagaggccaaccgacaactggagagttccagacagcttgcatcacggtttcat
gaacagtttgtagttagggatgatttaatgggtctggccattgggactcacggagcaaac
attcaacaagctcgtaaggtcccaggagtcactaacatagacctggatgaagaaacatgc
acctttcacatatatggagaggaccaggaggctgttcgtttagcgaggtgtttcctggag
ttttctgaagatgtcatcaaagttcccaggaacttagtaggaaaggtcattggcaagaat
ggtaaactgatccaggaagtggttgataagtctggtgtggtgcgggttcgtattgaacct
gaaaacgacaagaagccgtcggcagtggcggcagcagcagcagacgagggaatggtgcca
ttcgtttttgtggggaccaaggaaagcatctccaatgctacagtactgctggactaccat
ctgaactaccttaaggaggtggatcagctccgcctagagcgtctccagattgacgagcag
ctgagacagataggaggaggaggtggaggaggagggacgggacctcggaatctgaaagac
aaaacctacgtgttcgataacggcatgggactggggatgggaagaggagcgggaggagga
gggaagccctacaccggagggggaggacgaggggggcgaggacgaagaggaggaggtgca
gcttttgcctcaggcactaactcagaggcatccaatgcttcagagacagagtcagaccac
agagaggagctcagcgactggtcgctggcctgcaccgaggagctgatgacaggaggcggg
actctgcccagaaggacagatgggaggaagagaccaggcggtggtggaccaaggggacga
gggggaagaggaagaggaggaggagggtataaaggtgacgacatgcagtggggtgatcca
agacctcgtcatatcagagaccccaagaccagagcgccggaagacagcctacagatccgt
gtggacggtaacaacgagcgcagcgtgcaacactcgtcagggggtcgaggaggaggagga
ggaggaggagggccttcctcctcccagggtggtgtcggcagtgacggcccgtcccgtcat
catcatccgagaccaatcagagaccgagggatgaagaaggacaaacaagacgctcctccg
ctggtgaacggagtgtcgtag
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