Hippoglossus stenolepis (Pacific halibut): 118112128
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Entry
118112128 CDS
T08308
Symbol
sall1a
Name
(RefSeq) sal-like protein 1a isoform X1
KO
K19871
sal-like protein
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsp03000
]
118112128 (sall1a)
03036 Chromosome and associated proteins [BR:
hsp03036
]
118112128 (sall1a)
Transcription factors [BR:
hsp03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
118112128 (sall1a)
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
118112128 (sall1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-met
zf-C2H2_jaz
zf-C2H2_6
zf-C2H2_15
zf-C2H2_11
zf-C2HC_2
zf-H2C2_5
dsrm
UBZ_FAAP20
Motif
Other DBs
NCBI-GeneID:
118112128
NCBI-ProteinID:
XP_035017067
LinkDB
All DBs
Position
1:23746770..23763115
Genome browser
AA seq
1303 aa
AA seq
DB search
MSRRKQAKPQHFQSDPHQPLSEHNGDTELCSEDPPCKESDAHVCSRCCAEFFELSDLEEH
QKNCTKNQLVLIVNENPASPTGTFSPGSPHHNPDDQMNGTVNNTDETECSDLLERNHLER
EESMDVDISGMSSGHEEEGSHTESGSPINTVSNGGRATSGPAVGTSAISAPLPQLSNLTE
LGNFSMINSNVIIENLQSTKVAVAQFSQEARSTVGPRVAVPALMEQLLGLQQQQIHQLQL
IEQIRHQILLLASQSPEMQVPPTSAPGTMGPAASPLTTLSSHLSQQLAAAAGLAQNLASQ
SASISSLKQLAAAAQLPQPNPSTSETSQSISTLGPSTINAQSSDKRPSHMSSLHSQLSNS
SLVKSSKPAFGIGSLLSSAVNPLLPQPPPGNPMFSSSLPSVGSTVEDLNSLAALAQQRKG
KPPNVTSFEHKSSSEESFFKHKCRFCGKVFGSDSALQIHLRSHTGERPYKCNICGNRFST
RGNLKVHFQRHKEKYPHIQMNPYPVPEHLDNIPTSTGIPYGMSMPPEKPVTSWLDSKPVL
PTLTSSVGMLLPPTMPSLPHFIKKEDHSIAITSPSVTAKRDSGSAEPSAKSNDGVSEEGE
GATLPTSNEKTEEGSHSSCFMTNLSSASESTAEYTTSNSPPMMTNPLMPLMSDQFKAKFP
FGGILEPLHGSETSKLQQLVENIDRKVTDPNECVICHRVLSCQSALKMHYRTHTGERPFK
CKVCGRAFTTKGNLKTHYSVHRAMPPLRVQHSCPICQKKFTNAVVLQQHIRMHMGGHIPN
TPLPESYPESMVSDTGSFEERNFDDLDNFSDDNMEGLEEGPDSSVPDTPRSADAYHDSLC
NSPAPPEMFGQEGEARNGNAHSNETEELHASHMKVMANGLVEGDCLTNDSSSLGGDVESQ
SVGSPAVSESTSSMQAPSPTNMQPQPRKSPSLEERQQRVLSFEHTSANFLHSHPSNIGAL
DLTSVNPSKDPMGMLFPFRERSIIKNTSCDICGKTFACQSALDIHYRSHTKERPFICTAC
NRGFSTKGNLKQHMLTHQMRDLPSQLFEPSNTSLSCSPTPSLLSVVSINKPEINGFLHCL
HPDKDMPPGLVTSSASSSPVLSGAPPRRTPKQHFCNTCGKCFSSSSALQIHERTHTGEKP
FACSICGRAFTTKGNLKVHMGTHMWNSAPARRGRRLSVDGPMAFLGTNPVKFPEIFQKDM
VSRASHGDPASFWNQYAAAFSNGLAMKTNEISVIQNGGIPPMSGGLGNGGSSPIGGLTGS
LDKLHSMEPNAALAGLEKMANTENGAHFRFTRFMEDNKEIVTS
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggaggaaacaagcgaagccgcaacacttccaatccgaccctcatcagccttta
tcggaacacaatggggacacagaactttgctcagaggaccccccctgcaaggagtcagac
gcccacgtctgtagcagatgttgtgctgagttctttgaactatcggatcttgaagaacac
cagaagaattgcactaagaatcagttagttctgatagtgaatgaaaatcctgcctccccc
accgggactttctcgcctggatctccccaccataatcccgatgaccagatgaatggcaca
gttaataacactgatgaaacagagtgcagcgaccttttggagcgtaaccatctagaaaga
gaagaatccatggacgtggacatttccgggatgagcagtggtcatgaagaggaaggcagt
catacagagagtgggagtcccatcaacacagtcagcaatggtggccgggccacctctggc
cccgcagtgggtacttcagctatctctgcccctctacctcagctcagtaacctgactgaa
ctgggaaacttctccatgatcaacagcaatgtcatcattgaaaatcttcagagcaccaaa
gtggctgtggcccaattctcccaagaggcccgttccactgtgggccccagggtagcagtg
ccagcactgatggagcaactcctgggcctacaacagcaacaaattcaccagctgcagctt
attgagcagattcgccatcagatactgctactggcctcccagtccccagaaatgcaggtg
cccccaacttcagctccaggcacaatggggcctgctgccagcccactgaccacactcagc
tcacatctctcccaacagctggctgcagccgcaggcctagcgcagaacctggctagtcag
tcagcaagtattagcagcttaaaacaactggctgcggcggcacagctacctcagcccaac
ccaagcaccagtgagacatctcaaagcattagcacactggggccatcaacaatcaatgcc
cagtcctctgacaagaggccgagtcatatgagtagcctccactctcagctcagcaactcc
tcactagttaagtcatccaagccagcatttggaataggtagcttgttaagctctgcagtc
aatccccttctacctcagccccctcctggaaaccccatgttctccagctctctgccgagt
gtgggcagcactgtggaggacctcaactctttagcagctttggcccagcagaggaaaggc
aagccaccaaatgtcacctcatttgaacacaagagcagctcggaggaatcttttttcaag
cataagtgcaggttttgtggcaaggtgtttgggagtgacagtgccttgcaaatccacctg
cgctcccacactggcgagagaccatacaagtgtaatatctgtggaaaccgcttctccacc
cgtggtaacctgaaggtacatttccagcgtcataaagaaaaatacccacatatccagatg
aacccctaccctgttcctgagcatttagacaacataccgaccagcactggcattccatat
ggcatgtctatgccccctgagaaacctgtcaccagctggctggacagcaaaccagttttg
cccactctgacttcctcagtcggtatgctgctgccaccaaccatgccgagccttccacat
ttcatcaaaaaggaagatcattcaatagccataactagcccttctgttactgcaaagaga
gactcaggttctgctgagccttcagctaaaagtaatgatggagtgtctgaagagggtgaa
ggtgcgactctgcctacctcaaatgagaaaaccgaagaaggcagccactcctcatgcttc
atgacaaatttaagctctgcttcagaaagtacagctgagtacacaacgtcaaacagcccg
cccatgatgaccaacccacttatgccccttatgtctgatcagttcaaggctaagttcccc
tttggaggcattctggagcctctccatgggtcagagacctccaagcttcagcagcttgtg
gaaaacattgacaggaaggtgacagatccaaacgaatgtgtcatctgtcaccgggtgctg
agctgccagagtgctctgaaaatgcactatcgcactcatactggggaaaggccctttaag
tgtaaagtctgtggcagggcatttaccaccaaggggaatcttaagacccactacagcgtc
catagggccatgcctcctctcagagttcaacactcctgcccgatctgccagaagaagttc
acaaatgctgtggttctacagcaacatattcgcatgcatatgggtggacatatccccaac
acccctctgccagagagctacccggagtccatggtctctgacactggctcatttgaggag
agaaactttgatgatttggacaacttctctgatgacaacatggaaggattagaggagggc
cctgatagcagtgtgccagacacacccaggtcagctgatgcctaccatgacagtctgtgt
aactccccagctccccctgaaatgtttggccaagagggggaagcaagaaatggtaatgct
catagtaatgaaacagaggagctacatgccagccacatgaaggttatggcaaatggctta
gtcgagggggattgcctcaccaatgactcctcgtcactgggaggagatgttgaaagtcaa
agcgtcgggagtccagctgtgtcagaatctacctcctccatgcaggcgccatcccccact
aacatgcagccccaaccacgtaaatcccccagccttgaagaaaggcagcagagggtctta
tcctttgagcacacaagtgcaaacttcttgcactctcatccctctaacattggagccttg
gacctgacatctgtcaatccctcaaaagaccccatgggtatgttattcccctttcgtgag
cgtagcatcatcaagaacacatcatgtgacatctgtgggaagacatttgcttgtcagagt
gccttggacattcactatcgaagccataccaaagaacgaccatttatttgcacggcctgt
aacaggggtttctccacaaagggcaacctcaagcagcacatgctgacccatcaaatgaga
gacctgccctcacagctgtttgagccgtcaaacaccagcctgtcctgcagcccaacccct
tctctcctctctgttgtctctattaacaagcctgagatcaatggcttcctccattgcctc
caccctgacaaggacatgccaccaggactggtcacatcatctgcctcctcttccccagtg
ctttccggtgctccaccacgcaggacacccaaacaacacttctgcaacacctgcgggaag
tgtttctcctcctccagtgctctgcagatccacgagagaactcacacaggagagaaaccc
tttgcttgcagtatctgtggccgggctttcaccaccaaaggaaacctcaaggttcacatg
ggcacacacatgtggaacagcgctcctgccagacgaggccgcaggctctctgtggatggg
ccaatggccttcctgggtaccaacccagttaagtttccagagatcttccagaaggacatg
gtatcaagggcaagccacggggacccggccagtttctggaaccagtacgctgcagccttc
tccaacggccttgcgatgaagacaaatgaaatctctgtcatccagaatggaggcatccca
ccgatgtcaggtggattgggaaatgggggtagctctcccatcggcggcctgacaggcagc
ctagacaagctacacagcatggagcccaacgctgctctcgctggtcttgagaaaatggcc
aacacagagaacggggcccacttccgtttcacacggttcatggaggacaataaagaaatc
gtcaccagttag
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